FFCP PHASE1:Hg19::chr20:56285568..56285589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56937 | |EntrezGene=56937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14107 | |HGNC=14107 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NER4,Q5JY37,Q969W9 | |UniProt=Q8NER4,Q5JY37,Q969W9 | ||
|association_with_transcript=35bp_to_ENST00000395816,NM_199169,NM_199170,uc002xyr.2,uc002xys.2_5end | |association_with_transcript=35bp_to_ENST00000395816,NM_199169,NM_199170,uc002xyr.2,uc002xys.2_5end | ||
|cluster_id=chr20:56285568..56285589,- | |||
|description=CAGE_peak_4_at_PMEPA1_5end | |description=CAGE_peak_4_at_PMEPA1_5end | ||
|id=chr20:56285568..56285589,- | |id=chr20:56285568..56285589,- | ||
|ontology_enrichment_celltype=CL:0002076!7.44e-11!43;CL:0002368!2.76e-08!13;CL:0000223!1.60e-07!59;CL:0002057!8.65e-07!42 | |ontology_enrichment_celltype=CL:0002076!7.44e-11!43;CL:0002368!2.76e-08!13;CL:0000223!1.60e-07!59;CL:0002057!8.65e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.96e-11;13!CL:0002076;5.15e-09;42!CL:0000244;2.37e-07;4!CL:0000731;2.37e-07;4!CL:0002202;9.49e-07;9!CL:0002632;9.49e-07;9 | |ontology_enrichment_celltype_v019=CL:0002368;2.96e-11;13!CL:0002076;5.15e-09;42!CL:0000244;2.37e-07;4!CL:0000731;2.37e-07;4!CL:0002202;9.49e-07;9!CL:0002632;9.49e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.02e-11,13;CL:0002076,4.20e-11,42;CL:0000223,1.79e-08,58;CL:0000738,3.95e-08,136;CL:0000066,1.24e-07,253;CL:0000244,2.36e-07,4;CL:0000731,2.36e-07,4;CL:0002202,9.36e-07,9;CL:0002632,9.36e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.90e-09;5!UBERON:0000486;1.02e-07;12!UBERON:0005910;4.06e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000365;9.90e-09;5!UBERON:0000486;1.02e-07;12!UBERON:0005910;4.06e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.67e-09,5;UBERON:0005910,3.98e-07,6 | |||
|phase1_expression=0.54503513781167,0.428201047781966,1.12763523276777,0,0,1.74467704820074,0,0,0,3.19454117451962,1.39560233594486,0.436882744260345,0.527533956456907,0,0,0,0,0,0.487932798790507,0.738726348460727,0,0.940364164434263,2.86235987131057,2.6006140763848,3.51519390865448,0,0,0,1.96682138424452,2.30297638858328,2.16742572642506,2.75826367343678,3.0120591877825,0.369754010166788,0,0,0,5.53995408531877,1.60435557976113,2.17010870715852,0,0,0.257575567634187,0.726991193897824,3.77875943688809,0.242584061187816,1.39457422143411,2.46700732813095,3.09706370895104,0.575384784644301,0.512321413058201,0.945928919554341,0.689491361473237,1.29096936716765,0,1.31769637679823,4.36649840092553,2.24723484445085,2.75475503133812,3.85114832491312,0,0.329851300186716,0.598390972864896,0.426224750532694,2.03146467040009,2.26954089876456,3.73693349397345,0.251248665256743,0.521482918420201,0,1.21079900526674,2.94622108790052,1.89877432464531,0.211255286311942,0.425208599930087,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,1.28019066769952,0,0,0.661044872784862,0,5.69212969109448,7.6340834618222,9.55683070313072,6.60856642895129,6.1655941927969,0,2.55722701147983,5.89516144123747,7.19605246498282,0,6.8443675993054,1.4203434172042,3.89653456815823,0,0.883817722424512,0.886135578334485,0,0,0,0,0,0,6.3763222159686,2.1403266247177,0,0,5.74830740402882,2.74901956386104,0.759059076058509,0,0,0,0,0,0,0,0,12.7012248231581,6.15112450302067,5.06885413589796,0,0,0,0,1.00267582127178,0,7.95285947051099,3.89307896242109,2.26883561193763,0.665188192387692,1.40535657109002,0.130979075497713,1.45718115317017,0,0,0,0,9.53962497221368,5.71994910780128,8.54352253057999,0.198762407366705,0,1.04142150482278,0,0,1.6507082516404,1.04497483268405,0,0,0,0,0.760272105718513,0,0,3.24056779152704,0,0.22452937262617,0,3.06633274931766,0,0.366403487860815,3.9534125230819,0,2.61656431285521,1.49091585508596,0.379891534993739,0,0,0,0,3.20246987189115,8.38669664618344,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,1.23633464639278,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,0.252433774244115,0.184099797284599,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,6.76412986071539,6.00041465299836,8.03052867089211,0.365921118388786,0.132529768321485,0,0.414644220061482,0,0.36497735907583,0,0,0,0,0.721879481669586,0.236613600079688,0.674338760312407,0.241011029883482,0,0.217879444092406,0.474541238222193,0.404493924480493,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.171567810298526,5.26801369961403,1.1240175325762,1.60846355858609,0.370353780634118,0,0,0,4.75314660397815,0.70445216541493,0,0,0,4.74122638775565,3.43394464837949,0,0,0.297262324577456,2.81201501960331,8.06314215354526,4.53680311175637,0.716468181622786,0.581267877027924,3.06706143332169,0,0.176096868026452,0.414656231081544,0.720599767084807,0.37872730027914,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,1.42198887333556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0,6.69904584686553,3.23441362289276,2.31017465303547,1.52456774533478,1.30139853857622,0,1.67516265334349,1.91381625495949,0,0,0.414415513436035,0,0.500170521059677,0,0,0,0.315404830067869,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,2.68798433959754,4.31428401637234,4.05564719653088,0.909382714338778,0,0.30239029332968,0.992431231275107,0.920771839728375,0,0.640695746278505,0.511707249066704,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0,23.6597634957876,1.01289087829486,0,0,0,0.451199612907412,1.38627606787947,0.784349769176855,0,2.63879072232189,0,0,0.215915916102139,0,0,0,0,0,1.11937377361089,0,0,0,0,0.976135183992909,0.206082023295445,0.0915694648183434,0.082509499920588,1.72279661398852,7.80072295243825,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,6.28082678371717,9.03293316615999,4.59405764980503,2.32662895967765,0,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0.858749320451947,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,2.02910376962704,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,2.79044126903985,4.69211592875051,4.3556393944529,0.188287601553558,15.4981934161643,10.1082885400575,9.75546337780687,11.9456168107619,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.478278818186467,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,3.40963376167696,0.47748896947538,0,0.614321404198464,0,0.140669416410513,0,0,0,0.597743964753209,0.552567831062295,0,6.95427041014653,0,1.24415835064723,8.80709841243803,0.895105873378046,0,0.197286811273867,0,0,0,0.185536196323703,0,0.7812832832557,4.28553999981359,0,0.682760689712998,0.762760950878299,4.727753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| |phase1_expression=0.54503513781167,0.428201047781966,1.12763523276777,0,0,1.74467704820074,0,0,0,3.19454117451962,1.39560233594486,0.436882744260345,0.527533956456907,0,0,0,0,0,0.487932798790507,0.738726348460727,0,0.940364164434263,2.86235987131057,2.6006140763848,3.51519390865448,0,0,0,1.96682138424452,2.30297638858328,2.16742572642506,2.75826367343678,3.0120591877825,0.369754010166788,0,0,0,5.53995408531877,1.60435557976113,2.17010870715852,0,0,0.257575567634187,0.726991193897824,3.77875943688809,0.242584061187816,1.39457422143411,2.46700732813095,3.09706370895104,0.575384784644301,0.512321413058201,0.945928919554341,0.689491361473237,1.29096936716765,0,1.31769637679823,4.36649840092553,2.24723484445085,2.75475503133812,3.85114832491312,0,0.329851300186716,0.598390972864896,0.426224750532694,2.03146467040009,2.26954089876456,3.73693349397345,0.251248665256743,0.521482918420201,0,1.21079900526674,2.94622108790052,1.89877432464531,0.211255286311942,0.425208599930087,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,1.28019066769952,0,0,0.661044872784862,0,5.69212969109448,7.6340834618222,9.55683070313072,6.60856642895129,6.1655941927969,0,2.55722701147983,5.89516144123747,7.19605246498282,0,6.8443675993054,1.4203434172042,3.89653456815823,0,0.883817722424512,0.886135578334485,0,0,0,0,0,0,6.3763222159686,2.1403266247177,0,0,5.74830740402882,2.74901956386104,0.759059076058509,0,0,0,0,0,0,0,0,12.7012248231581,6.15112450302067,5.06885413589796,0,0,0,0,1.00267582127178,0,7.95285947051099,3.89307896242109,2.26883561193763,0.665188192387692,1.40535657109002,0.130979075497713,1.45718115317017,0,0,0,0,9.53962497221368,5.71994910780128,8.54352253057999,0.198762407366705,0,1.04142150482278,0,0,1.6507082516404,1.04497483268405,0,0,0,0,0.760272105718513,0,0,3.24056779152704,0,0.22452937262617,0,3.06633274931766,0,0.366403487860815,3.9534125230819,0,2.61656431285521,1.49091585508596,0.379891534993739,0,0,0,0,3.20246987189115,8.38669664618344,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,1.23633464639278,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,0.252433774244115,0.184099797284599,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,6.76412986071539,6.00041465299836,8.03052867089211,0.365921118388786,0.132529768321485,0,0.414644220061482,0,0.36497735907583,0,0,0,0,0.721879481669586,0.236613600079688,0.674338760312407,0.241011029883482,0,0.217879444092406,0.474541238222193,0.404493924480493,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.171567810298526,5.26801369961403,1.1240175325762,1.60846355858609,0.370353780634118,0,0,0,4.75314660397815,0.70445216541493,0,0,0,4.74122638775565,3.43394464837949,0,0,0.297262324577456,2.81201501960331,8.06314215354526,4.53680311175637,0.716468181622786,0.581267877027924,3.06706143332169,0,0.176096868026452,0.414656231081544,0.720599767084807,0.37872730027914,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,1.42198887333556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0,6.69904584686553,3.23441362289276,2.31017465303547,1.52456774533478,1.30139853857622,0,1.67516265334349,1.91381625495949,0,0,0.414415513436035,0,0.500170521059677,0,0,0,0.315404830067869,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,2.68798433959754,4.31428401637234,4.05564719653088,0.909382714338778,0,0.30239029332968,0.992431231275107,0.920771839728375,0,0.640695746278505,0.511707249066704,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0,23.6597634957876,1.01289087829486,0,0,0,0.451199612907412,1.38627606787947,0.784349769176855,0,2.63879072232189,0,0,0.215915916102139,0,0,0,0,0,1.11937377361089,0,0,0,0,0.976135183992909,0.206082023295445,0.0915694648183434,0.082509499920588,1.72279661398852,7.80072295243825,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,6.28082678371717,9.03293316615999,4.59405764980503,2.32662895967765,0,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0.858749320451947,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,2.02910376962704,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,2.79044126903985,4.69211592875051,4.3556393944529,0.188287601553558,15.4981934161643,10.1082885400575,9.75546337780687,11.9456168107619,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.478278818186467,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,3.40963376167696,0.47748896947538,0,0.614321404198464,0,0.140669416410513,0,0,0,0.597743964753209,0.552567831062295,0,6.95427041014653,0,1.24415835064723,8.80709841243803,0.895105873378046,0,0.197286811273867,0,0,0,0.185536196323703,0,0.7812832832557,4.28553999981359,0,0.682760689712998,0.762760950878299,4.727753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| ||
|short_description=p4@PMEPA1 | |short_description=p4@PMEPA1 | ||
}} | }} |
Latest revision as of 04:44, 17 September 2015
Short description: | p4@PMEPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PMEPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000395816, NM_199169, NM_199170, uc002xyr.2, uc002xys.2_5end |
EntrezGene: | PMEPA1 |
HGNC: | 14107 |
UniProt: | Q8NER4Q5JY37Q969W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.02e-11 | 13 |
endo-epithelial cell | 4.20e-11 | 42 |
endodermal cell | 1.79e-08 | 58 |
leukocyte | 3.95e-08 | 136 |
epithelial cell | 1.24e-07 | 253 |
transitional epithelial cell | 2.36e-07 | 4 |
urothelial cell | 2.36e-07 | 4 |
epithelial cell of tracheobronchial tree | 9.36e-07 | 9 |
epithelial cell of lower respiratory tract | 9.36e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 9.67e-09 | 5 |
transitional epithelium | 3.98e-07 | 6 |