FFCP PHASE1:Hg19::chr2:42104692..42104706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388942 | |EntrezGene=388942 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000398796,ENST00000442214,NR_033996,uc002rse.2,uc010fao.1_5end | |association_with_transcript=0bp_to_ENST00000398796,ENST00000442214,NR_033996,uc002rse.2,uc010fao.1_5end | ||
|cluster_id=chr2:42104692..42104706,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_1_at_LOC388942_5end | |description=CAGE_peak_1_at_LOC388942_5end | ||
|id=chr2:42104692..42104706,+ | |id=chr2:42104692..42104706,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.56e-28!3;CL:0000861!1.56e-28!3;CL:0002541!5.47e-13!3;CL:0000167!8.95e-11!1;CL:0000164!8.95e-11!1;CL:0000502!8.95e-11!1;CL:0000172!8.95e-11!1;CL:0000173!8.95e-11!1;CL:0002351!8.95e-11!1;CL:0000235!5.83e-09!10 | |ontology_enrichment_celltype=CL:0002150!1.56e-28!3;CL:0000861!1.56e-28!3;CL:0002541!5.47e-13!3;CL:0000167!8.95e-11!1;CL:0000164!8.95e-11!1;CL:0000502!8.95e-11!1;CL:0000172!8.95e-11!1;CL:0000173!8.95e-11!1;CL:0002351!8.95e-11!1;CL:0000235!5.83e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.67e-23;1!CL:0000164;1.67e-23;1!CL:0000502;1.67e-23;1!CL:0000172;1.67e-23;1!CL:0000173;1.67e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.10e-23,1;CL:0000164,2.10e-23,1;CL:0000502,2.10e-23,1;CL:0000172,2.10e-23,1;CL:0000173,2.10e-23,1;CL:0002351,2.10e-23,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.67e-23;1!UBERON:0006298;4.59e-23;1 | |||
|ontology_enrichment_disease=DOID:4430!8.95e-11!1 | |ontology_enrichment_disease=DOID:4430!8.95e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.67e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.10e-23,1;DOID:0050687,2.10e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.47e-13!3;UBERON:0000920!5.47e-13!3;UBERON:0003124!3.82e-12!7;UBERON:0001736!1.30e-10!1;UBERON:0006298!1.30e-10!1;UBERON:0006834!3.96e-10!1;UBERON:0007023!9.65e-08!115;UBERON:0001044!3.66e-07!6;UBERON:0003293!3.66e-07!6;UBERON:0003294!3.66e-07!6;UBERON:0010047!3.66e-07!6;UBERON:0000167!3.66e-07!6;UBERON:0000995!5.79e-07!21;UBERON:0000002!7.75e-07!6;UBERON:0001560!7.75e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;4.59e-23;1!UBERON:0001044;1.17e-15;6!UBERON:0003293;1.17e-15;6!UBERON:0003294;1.17e-15;6!UBERON:0010047;1.17e-15;6!UBERON:0003408;1.17e-15;6!UBERON:0000167;1.17e-15;6!UBERON:0001829;3.06e-12;2!UBERON:0001041;2.99e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,5.13e-23,1;UBERON:0006298,5.13e-23,1;UBERON:0001044,1.13e-15,6;UBERON:0003293,1.13e-15,6;UBERON:0003294,1.13e-15,6;UBERON:0010047,1.13e-15,6;UBERON:0000167,1.13e-15,6;UBERON:0001829,3.24e-12,2;UBERON:0003408,8.46e-10,10 | |||
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|short_description=p1@LOC388942 | |short_description=p1@LOC388942 | ||
}} | }} |
Latest revision as of 06:26, 17 September 2015
Short description: | p1@LOC388942 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC388942_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_ENST00000398796, ENST00000442214, NR_033996, uc002rse.2, uc010fao.1_5end |
EntrezGene: | LOC388942 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.10e-23 | 1 |
enteroendocrine cell | 2.10e-23 | 1 |
type D enteroendocrine cell | 2.10e-23 | 1 |
somatostatin secreting cell | 2.10e-23 | 1 |
pancreatic D cell | 2.10e-23 | 1 |
progenitor cell of endocrine pancreas | 2.10e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 5.13e-23 | 1 |
submandibular gland primordium | 5.13e-23 | 1 |
saliva-secreting gland | 1.13e-15 | 6 |
gland of oral region | 1.13e-15 | 6 |
gland of foregut | 1.13e-15 | 6 |
oral gland | 1.13e-15 | 6 |
oral cavity | 1.13e-15 | 6 |
major salivary gland | 3.24e-12 | 2 |
gland of gut | 8.46e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.10e-23 | 1 |
cell type cancer | 2.10e-07 | 143 |