FFCP PHASE1:Hg19::chr1:153599687..153599702,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:153599687..153599702,- to FFCP PHASE1:Hg19::chr1:153599687..153599702,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6284 | |EntrezGene=6284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |HGNC=10490 | ||
|TSSclassifier=strong | |||
|UniProt=Q99584 | |UniProt=Q99584 | ||
|association_with_transcript=41bp_to_ENST00000392623,NM_001024212,uc001fcg.2,uc009woh.2_5end | |||
|cluster_id=chr1:153599687..153599702,- | |||
|description=CAGE_peak_14_at_S100A13_5end | |||
|id=chr1:153599687..153599702,- | |||
|ontology_enrichment_celltype=CL:0000055!8.60e-11!180;CL:0000499!9.63e-08!27;CL:0000359!9.03e-07!32;CL:1000507!9.84e-07!12;CL:1000494!9.84e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002149;3.29e-14;6!CL:0002255;3.29e-14;6!CL:1000507;1.14e-11;10!CL:1000494;1.14e-11;10!CL:0000346;5.31e-11;3!CL:1000428;5.31e-11;3!CL:0002603;2.27e-10;3!CL:0002577;2.84e-10;3!CL:0000499;8.46e-10;28!CL:0000669;3.37e-08;4!CL:0002575;1.58e-07;2!CL:1000449;1.59e-07;15!CL:0002559;9.75e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.88e-14,6;CL:0002255,2.88e-14,6;CL:1000507,7.08e-12,10;CL:1000494,7.08e-12,10;CL:0000346,4.70e-11,3;CL:1000428,4.70e-11,3;CL:0002577,1.26e-10,3;CL:0002603,1.64e-10,3;CL:0000499,1.01e-09,28;CL:0000669,4.72e-08,4;CL:1000449,1.17e-07,15;CL:0002575,2.31e-07,2;CL:0002559,9.09e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;3.29e-14;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.88e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0002100!1.31e-10!216;UBERON:0003104!3.72e-09!238;UBERON:0009142!3.72e-09!238;UBERON:0000475!4.01e-09!365;UBERON:0000486!4.91e-07!82;UBERON:0004290!5.84e-07!70;UBERON:0005256!6.16e-07!143;UBERON:0000481!6.85e-07!347;UBERON:0000914!8.26e-07!83;UBERON:0002329!8.26e-07!83;UBERON:0003077!8.26e-07!83;UBERON:0003059!8.26e-07!83;UBERON:0007282!8.26e-07!83;UBERON:0009618!8.26e-07!83;UBERON:0007285!8.26e-07!83;UBERON:0009773!9.84e-07!12;UBERON:0001231!9.84e-07!12;UBERON:0004810!9.84e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.14e-11;10!UBERON:0009773;1.14e-11;10!UBERON:0001231;1.14e-11;10!UBERON:0004810;1.14e-11;10!UBERON:0000412;5.31e-11;3!UBERON:0001992;5.31e-11;3!UBERON:0002037;9.58e-09;6!UBERON:0001987;8.38e-08;4!UBERON:0006555;1.59e-07;15!UBERON:0004819;1.59e-07;15!UBERON:0001285;1.59e-07;15!UBERON:0007684;1.59e-07;15!UBERON:0003513;1.92e-07;7!UBERON:0002073;9.75e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,7.08e-12,10;UBERON:0000412,4.70e-11,3;UBERON:0001992,4.70e-11,3;UBERON:0000995,5.02e-09,21;UBERON:0002037,6.59e-09,6;UBERON:0006215,6.59e-09,6;UBERON:0005795,1.50e-08,22;UBERON:0003975,1.50e-08,22;UBERON:0001987,4.60e-08,4;UBERON:0004340,4.60e-08,4;UBERON:0004211,1.17e-07,15;UBERON:0009773,1.17e-07,15;UBERON:0001231,1.17e-07,15;UBERON:0001285,1.17e-07,15;UBERON:0007684,1.17e-07,15;UBERON:0004208,1.17e-07,15;UBERON:0003513,1.31e-07,7;UBERON:0004175,2.35e-07,25;UBERON:0006555,3.93e-07,16;UBERON:0004819,3.93e-07,16;UBERON:0002073,9.09e-07,5;UBERON:0005086,9.09e-07,5 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0.994192127183747,0.672325146451775,0,0,0.487932798790507,1.23121058076788,3.06001036866379,1.88072832886853,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.361439152384566,1.00267582127178,0.434539556882471,0,0,1.03988298880475,0.221729397462564,0.966182642624386,0.130979075497713,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,2.48485975847659,0.12663051166458,0,0,0.354668382198357,0,0,0,0.622422070799533,0,0,0,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.352303495931295,0.485618833104395,0.98315564691574,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0.919463387397059,0.150238058906597,0.340296549480063,1.07633781413317,0.640672166455702,0.423863802319124,0,0.412210116953756,0,0.930584281657949,0.168776332241266,0.487185025805993,0.504867548488229,0.552299391853796,0.161646056818812,0,0.302256294682921,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0,4.69348596989448,5.78916844373597,1.38134921352481,0.464367928031979,0.721879481669586,0.354920400119532,0.337169380156203,0.482022059766964,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,2.80483547606892,0.4115740113314,4.41026134156626,0,0,0,0,0,0.171567810298526,0,0,0.301586917234893,0.277765335475589,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,1.30788020649984,0.4400297149257,0,0,0,0,0,0,0,0.532844358032199,0,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.723906533337896,0.410952645100767,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.178428988797162,0.630809660135739,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.173767228936166,1.17480694477644,2.05886054286514,0,0,0,1.81876542867756,1.66435439510497,2.11673205330776,0.496215615637554,0.306923946576125,1.12264037773229,0.128139149255701,0,0.64341568457443,2.96836132889982,0.462629081407967,0.355123450626254,0,0,0.813472649219715,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0.655622074797121,1.80479845162965,0.924184045252977,2.35304930753057,7.30696123266303,0.211103257785751,0,0.170093705276516,0.863663664408557,0,0.541892875087706,4.01351819083883,0.509752546090077,1.66215201785745,2.46262230194396,0,0,0,0,0,0.103041011647722,0.457847324091717,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0,0,0,0.356128142586949,0.165284915360978,0.192190067365106,0,0.2023155617111,1.39453664789186,0.31481234683064,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0.744316738719335,0.949138274156178,0.190630193923825,0,0,0.318203247925937,1.56989728039846,0,0,0,0.404364963146632,1.58510321173008,1.68503382495592,0,0.731140468893853,1.05650146756755,0,0,1.13008116620243,0,1.99031692572366,1.75380354101505,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0.633322905892992,1.31717957183961,0,0,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0.284136146806413,0,0.593929361665277,0,0,0.422008249231538,0.890469640183247,0,0,0.19924798825107,0.552567831062295,0,0.715880777515084,0,0.311039587661807,0.179736702294654,0,0,0,0,1.11136990144637,0,0,1.99613798001194,0.520855522170466,0,0.724999575434793,0.1137934482855,0,0.709163045303809,0,0,0,0,0.241192877250816,0,0.442317039724898,1.47773809476774,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,1.89898258075224,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0.330991955875499,0.627865836814451,1.19472429772959,2.27687636823834,0,2.42983633669183,0.195984794828755,0.261177619741208,0.17472666824203,0.687944129886466,0.580537987734511,0.146178634172371,0.328461828212837,0.0969890164884194,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0.14405479798815,0.248505071130865,0.235694034616795,0.815425236441684,1.255234155748,0.203996435272644,0,0,0,0,0.859530882839914,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,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| ||
|short_description=p14@S100A13 | |||
}} | }} |
Latest revision as of 06:41, 17 September 2015
Short description: | p14@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000392623, NM_001024212, uc001fcg.2, uc009woh.2_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | Q99584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.88e-14 | 6 |
stromal cell of endometrium | 2.88e-14 | 6 |
kidney tubule cell | 7.08e-12 | 10 |
nephron tubule epithelial cell | 7.08e-12 | 10 |
hair follicle dermal papilla cell | 4.70e-11 | 3 |
stem cell of epidermis | 4.70e-11 | 3 |
placental epithelial cell | 1.26e-10 | 3 |
astrocyte of the cerebellum | 1.64e-10 | 3 |
stromal cell | 1.01e-09 | 28 |
pericyte cell | 4.72e-08 | 4 |
epithelial cell of nephron | 1.17e-07 | 15 |
central nervous system pericyte | 2.31e-07 | 2 |
hair follicle cell | 9.09e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 7.08e-12 | 10 |
dermal papilla | 4.70e-11 | 3 |
papillary layer of dermis | 4.70e-11 | 3 |
uterus | 5.02e-09 | 21 |
cerebellum | 6.59e-09 | 6 |
rhombic lip | 6.59e-09 | 6 |
embryonic uterus | 1.50e-08 | 22 |
internal female genitalia | 1.50e-08 | 22 |
placenta | 4.60e-08 | 4 |
allantois | 4.60e-08 | 4 |
nephron epithelium | 1.17e-07 | 15 |
renal tubule | 1.17e-07 | 15 |
nephron tubule | 1.17e-07 | 15 |
nephron | 1.17e-07 | 15 |
uriniferous tubule | 1.17e-07 | 15 |
nephrogenic mesenchyme | 1.17e-07 | 15 |
trunk blood vessel | 1.31e-07 | 7 |
internal genitalia | 2.35e-07 | 25 |
excretory tube | 3.93e-07 | 16 |
kidney epithelium | 3.93e-07 | 16 |
hair follicle | 9.09e-07 | 5 |
hair follicle placode | 9.09e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.88e-14 | 6 |