FFCP PHASE1:Hg19::chr1:154127518..154127560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91181 | |EntrezGene=91181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29915 | |HGNC=29915 | ||
|TSSclassifier=strong | |||
|UniProt=E7EP56,Q5VU65,Q9UF31 | |UniProt=E7EP56,Q5VU65,Q9UF31 | ||
|association_with_transcript=31bp_to_ENST00000271854,ENST00000368559,NM_001159484,NM_207308,uc001fdw.2,uc010peh.1_5end | |association_with_transcript=31bp_to_ENST00000271854,ENST00000368559,NM_001159484,NM_207308,uc001fdw.2,uc010peh.1_5end | ||
|cluster_id=chr1:154127518..154127560,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_NUP210L_5end | |description=CAGE_peak_1_at_NUP210L_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.05e-16;2!CL:0000558;1.05e-16;2!CL:0002537;2.43e-07;5 | |ontology_enrichment_celltype_v019=CL:0000764;1.05e-16;2!CL:0000558;1.05e-16;2!CL:0002537;2.43e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.45e-16,2;CL:0000765,1.45e-16,2;CL:0000050,1.45e-16,2;CL:0000038,1.45e-16,2;CL:0000558,1.45e-16,2;CL:0000547,1.45e-16,2;CL:0000549,1.45e-16,2;CL:0000550,1.45e-16,2;CL:0000552,1.45e-16,2;CL:0002537,2.43e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-34!115;UBERON:0001893!2.09e-11!34;UBERON:0001950!4.05e-11!20;UBERON:0001049!8.24e-11!57;UBERON:0005068!8.24e-11!57;UBERON:0006241!8.24e-11!57;UBERON:0007135!8.24e-11!57;UBERON:0002616!3.18e-10!59;UBERON:0002780!3.25e-10!41;UBERON:0001890!3.25e-10!41;UBERON:0006240!3.25e-10!41;UBERON:0002791!3.77e-10!33;UBERON:0002619!6.15e-10!22;UBERON:0003075!6.21e-10!86;UBERON:0007284!6.21e-10!86;UBERON:0003080!6.93e-10!42;UBERON:0005743!1.21e-09!86;UBERON:0002020!1.38e-09!34;UBERON:0003528!1.38e-09!34;UBERON:0001017!2.57e-09!82;UBERON:0002346!3.17e-09!90;UBERON:0001869!5.19e-09!32;UBERON:0000955!7.05e-09!69;UBERON:0006238!7.05e-09!69;UBERON:0000956!1.64e-08!25;UBERON:0000203!1.64e-08!25;UBERON:0000073!3.45e-08!94;UBERON:0001016!3.45e-08!94 | |ontology_enrichment_uberon=UBERON:0007023!2.35e-34!115;UBERON:0001893!2.09e-11!34;UBERON:0001950!4.05e-11!20;UBERON:0001049!8.24e-11!57;UBERON:0005068!8.24e-11!57;UBERON:0006241!8.24e-11!57;UBERON:0007135!8.24e-11!57;UBERON:0002616!3.18e-10!59;UBERON:0002780!3.25e-10!41;UBERON:0001890!3.25e-10!41;UBERON:0006240!3.25e-10!41;UBERON:0002791!3.77e-10!33;UBERON:0002619!6.15e-10!22;UBERON:0003075!6.21e-10!86;UBERON:0007284!6.21e-10!86;UBERON:0003080!6.93e-10!42;UBERON:0005743!1.21e-09!86;UBERON:0002020!1.38e-09!34;UBERON:0003528!1.38e-09!34;UBERON:0001017!2.57e-09!82;UBERON:0002346!3.17e-09!90;UBERON:0001869!5.19e-09!32;UBERON:0000955!7.05e-09!69;UBERON:0006238!7.05e-09!69;UBERON:0000956!1.64e-08!25;UBERON:0000203!1.64e-08!25;UBERON:0000073!3.45e-08!94;UBERON:0001016!3.45e-08!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;1.55e-09;1!UBERON:0011215;1.55e-09;1!UBERON:0001018;1.55e-09;1!UBERON:0002473;1.55e-09;1!UBERON:0005340;1.55e-09;1!UBERON:0003544;1.55e-09;1!UBERON:0005970;1.55e-09;1!UBERON:0002316;1.55e-09;1!UBERON:0001020;1.55e-09;1!UBERON:0002437;1.55e-09;1!UBERON:0002581;3.25e-09;1!UBERON:0006834;3.25e-09;1!UBERON:0001872;3.23e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002336;1.55e-09;1!UBERON:0011215;1.55e-09;1!UBERON:0001018;1.55e-09;1!UBERON:0002473;1.55e-09;1!UBERON:0005340;1.55e-09;1!UBERON:0003544;1.55e-09;1!UBERON:0005970;1.55e-09;1!UBERON:0002316;1.55e-09;1!UBERON:0001020;1.55e-09;1!UBERON:0002437;1.55e-09;1!UBERON:0002581;3.25e-09;1!UBERON:0006834;3.25e-09;1!UBERON:0001872;3.23e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.21e-13,114;UBERON:0002336,1.69e-09,1;UBERON:0011215,1.69e-09,1;UBERON:0001018,1.69e-09,1;UBERON:0002473,1.69e-09,1;UBERON:0005340,1.69e-09,1;UBERON:0003544,1.69e-09,1;UBERON:0005970,1.69e-09,1;UBERON:0002316,1.69e-09,1;UBERON:0001020,1.69e-09,1;UBERON:0002437,1.69e-09,1;UBERON:0006834,1.99e-09,1;UBERON:0002581,4.15e-09,1;UBERON:0001872,3.04e-07,5 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0,6.94137970143765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0.267440195783507,0,0,0,0,0.361439152384566,0,0.724232594804119,0,0,0,0,0,21.1531206928806,0,0,0,0,0.398873881556595,0,0,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0,0,0,0,0,0,0,21.7212036944683,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,2.07875276582847,1.22864280839693,0,0,0,0,0,1.79323189425963,0,0,0,0,0,0,0,0,1.479651084554,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,2.02203398942031,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.01297273529406,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789744236554321,0,0,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0.26446520348538,0,0,0.320362237703084,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,0.319267718114302,0.205116364240755,0,0.414943514785307,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.675375846183947,0,0.206686796501184,1.58539525484767,0,0,0.992422356778588,0,0,0,0,0,0,0.620916591138472,0,0,0.611727596791485,1.11813715056843,0,0,0.470958557103084,0,0,0,0,0,1.1436247068265,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2644426535001,0,0,0,3.67722482630858,0,0,0.297046400327086,0,0,0,0.837952543656503,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,43.8758662683606,57.6122879835784,0,0.20686599172379,0,0,0.452122368852043,0.248298857183432,0,0.0636471582781649,0.404234377916439,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,1.58913877437726,0,0,0,0 | ||
|short_description=p1@NUP210L | |short_description=p1@NUP210L | ||
}} | }} |
Latest revision as of 08:22, 17 September 2015
Short description: | p1@NUP210L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUP210L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 31bp_to_ENST00000271854, ENST00000368559, NM_001159484, NM_207308, uc001fdw.2, uc010peh.1_5end |
EntrezGene: | NUP210L |
HGNC: | 29915 |
UniProt: | E7EP56Q5VU65Q9UF31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.45e-16 | 2 |
erythroblast | 1.45e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 1.45e-16 | 2 |
erythroid progenitor cell | 1.45e-16 | 2 |
reticulocyte | 1.45e-16 | 2 |
proerythroblast | 1.45e-16 | 2 |
basophilic erythroblast | 1.45e-16 | 2 |
polychromatophilic erythroblast | 1.45e-16 | 2 |
orthochromatic erythroblast | 1.45e-16 | 2 |
amnion mesenchymal stem cell | 2.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.21e-13 | 114 |
corpus callosum | 1.69e-09 | 1 |
central nervous system cell part cluster | 1.69e-09 | 1 |
axon tract | 1.69e-09 | 1 |
intercerebral commissure | 1.69e-09 | 1 |
dorsal telencephalic commissure | 1.69e-09 | 1 |
brain white matter | 1.69e-09 | 1 |
brain commissure | 1.69e-09 | 1 |
white matter | 1.69e-09 | 1 |
nervous system commissure | 1.69e-09 | 1 |
cerebral hemisphere white matter | 1.69e-09 | 1 |
uterus or analog | 1.99e-09 | 1 |
postcentral gyrus | 4.15e-09 | 1 |
parietal lobe | 3.04e-07 | 5 |