FFCP PHASE1:Hg19::chr19:36157417..36157420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11045 | |EntrezGene=11045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12577 | |HGNC=12577 | ||
|TSSclassifier=strong | |||
|UniProt=O00322 | |UniProt=O00322 | ||
|association_with_transcript=-294bp_to_ENST00000222275,ENST00000379013,NM_007000,uc002oaw.2,uc010eeh.2_5end | |association_with_transcript=-294bp_to_ENST00000222275,ENST00000379013,NM_007000,uc002oaw.2,uc010eeh.2_5end | ||
|cluster_id=chr19:36157417..36157420,+ | |||
|coexpression_cluster_id=C245 | |||
|description=CAGE_peak_1_at_UPK1A_5end | |description=CAGE_peak_1_at_UPK1A_5end | ||
|id=chr19:36157417..36157420,+ | |id=chr19:36157417..36157420,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.97e-34;1!UBERON:0009847;1.85e-12;3!UBERON:0003353;1.85e-12;3 | |||
|ontology_enrichment_disease=DOID:178!4.06e-12!1;DOID:326!4.06e-12!1;DOID:3978!4.06e-12!1;DOID:3394!4.06e-12!1;DOID:5844!4.06e-12!1 | |ontology_enrichment_disease=DOID:178!4.06e-12!1;DOID:326!4.06e-12!1;DOID:3978!4.06e-12!1;DOID:3394!4.06e-12!1;DOID:5844!4.06e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:178;5.97e-34;1!DOID:326;5.97e-34;1!DOID:3978;5.97e-34;1!DOID:3394;5.97e-34;1!DOID:5844;5.97e-34;1!DOID:114;9.86e-18;2!DOID:1287;1.50e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,7.06e-34,1;DOID:326,7.06e-34,1;DOID:3978,7.06e-34,1;DOID:3394,7.06e-34,1;DOID:5844,7.06e-34,1;DOID:114,1.07e-17,2;DOID:1287,1.57e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007029!6.97e-12!1;UBERON:0002372!1.19e-11!1;UBERON:0001961!1.19e-11!1;UBERON:0001744!1.19e-11!1;UBERON:0001735!1.19e-11!1;UBERON:0007023!8.57e-08!115;UBERON:0001255!9.44e-07!2;UBERON:0001556!9.44e-07!2 | |ontology_enrichment_uberon=UBERON:0007029!6.97e-12!1;UBERON:0002372!1.19e-11!1;UBERON:0001961!1.19e-11!1;UBERON:0001744!1.19e-11!1;UBERON:0001735!1.19e-11!1;UBERON:0007023!8.57e-08!115;UBERON:0001255!9.44e-07!2;UBERON:0001556!9.44e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;5.97e-34;1!UBERON:0001255;6.48e-18;2!UBERON:0001556;6.48e-18;2!UBERON:0001043;2.74e-12;3!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,6.48e-18,2;UBERON:0001556,6.48e-18,2;UBERON:0001043,3.24e-12,3;UBERON:0009143,3.24e-12,3;UBERON:0000162,1.57e-10,14;UBERON:0001353,1.57e-10,14;UBERON:0000163,1.57e-10,14;UBERON:0006866,1.57e-10,14;UBERON:0000164,1.57e-10,14;UBERON:0000931,1.57e-10,14;UBERON:0004122,6.78e-10,15;UBERON:0001046,5.16e-08,19;UBERON:0007023,1.11e-07,114 | |||
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|short_description=p1@UPK1A | |short_description=p1@UPK1A | ||
}} | }} |
Latest revision as of 12:50, 17 September 2015
Short description: | p1@UPK1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UPK1A_5end |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | -294bp_to_ENST00000222275, ENST00000379013, NM_007000, uc002oaw.2, uc010eeh.2_5end |
EntrezGene: | UPK1A |
HGNC: | 12577 |
UniProt: | O00322 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary bladder | 6.48e-18 | 2 |
lower urinary tract | 6.48e-18 | 2 |
esophagus | 3.24e-12 | 3 |
esophageal region | 3.24e-12 | 3 |
cloaca | 1.57e-10 | 14 |
anal region | 1.57e-10 | 14 |
embryonic cloaca | 1.57e-10 | 14 |
terminal part of digestive tract | 1.57e-10 | 14 |
primitive urogenital sinus | 1.57e-10 | 14 |
proctodeum | 1.57e-10 | 14 |
genitourinary system | 6.78e-10 | 15 |
hindgut | 5.16e-08 | 19 |
adult organism | 1.11e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 7.06e-34 | 1 |
ischemia | 7.06e-34 | 1 |
extrinsic cardiomyopathy | 7.06e-34 | 1 |
myocardial ischemia | 7.06e-34 | 1 |
myocardial infarction | 7.06e-34 | 1 |
heart disease | 1.07e-17 | 2 |
cardiovascular system disease | 1.57e-09 | 4 |