FFCP PHASE1:Hg19::chr11:3078616..3078662,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:3078616..3078662,-
|short_description=p1@CARS
|description=CAGE_peak_1_at_CARS_5end
|association_with_transcript=0bp_to_ENST00000278224,ENST00000397114,EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=833 | |EntrezGene=833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1493 | |HGNC=1493 | ||
|UniProt=A8MVQ3, | |TSSclassifier=strong | ||
|UniProt=A8MVQ3,B4DKY1,C9JLN0,E9PRS8,E9PPK8 | |||
|association_with_transcript=0bp_to_ENST00000278224,ENST00000397114,ENST00000401769,ENST00000439280,ENST00000527330,ENST00000529772_5end | |||
|cluster_id=chr11:3078616..3078662,- | |||
|description=CAGE_peak_1_at_CARS_5end | |||
|id=chr11:3078616..3078662,- | |||
|ontology_enrichment_celltype=CL:0000548!2.08e-23!679;CL:0000004!2.08e-23!679;CL:0000255!2.08e-23!679;CL:0000012!5.09e-22!682;CL:0000144!5.06e-17!625;CL:0000055!9.06e-17!180;CL:0002371!1.54e-15!591;CL:0000003!4.04e-15!722;CL:0000057!2.66e-14!75;CL:0000063!8.11e-09!578;CL:0002321!1.86e-08!248;CL:0000220!1.87e-08!246;CL:0002620!3.84e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.62e-08;23!CL:0000057;2.63e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.77e-14,76;CL:0002321,8.37e-09,250;CL:0002620,3.84e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.10e-09!95;UBERON:0002097!2.06e-08!40;UBERON:0002199!3.49e-08!45;UBERON:0002416!3.49e-08!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.12e-10,99;UBERON:0002097,2.56e-08,41;UBERON:0002199,4.15e-08,46;UBERON:0002416,4.15e-08,46 | |||
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| ||
|short_description=p1@CARS | |||
}} | }} |
Latest revision as of 14:08, 17 September 2015
Short description: | p1@CARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000278224, ENST00000397114, ENST00000401769, ENST00000439280, ENST00000527330, ENST00000529772_5end |
EntrezGene: | CARS |
HGNC: | 1493 |
UniProt: | A8MVQ3B4DKY1C9JLN0E9PRS8E9PPK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.77e-14 | 76 |
embryonic cell | 8.37e-09 | 250 |
skin fibroblast | 3.84e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.12e-10 | 99 |
skin of body | 2.56e-08 | 41 |
integument | 4.15e-08 | 46 |
integumental system | 4.15e-08 | 46 |