FFCP PHASE1:Hg19::chr16:69364449..69364465,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:69364449..69364465,- to FFCP PHASE1:Hg19::chr16:69364449..69364465,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64146 | |EntrezGene=64146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30012 | |HGNC=30012 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBH1 | |UniProt=Q9HBH1 | ||
|association_with_transcript=7bp_to_AF322879_5end | |||
|cluster_id=chr16:69364449..69364465,- | |||
|description=CAGE_peak_2_at_PDF_5end | |||
|id=chr16:69364449..69364465,- | |||
|ontology_enrichment_celltype=CL:0000066!2.94e-11!254;CL:0002321!7.08e-08!248;CL:0000220!7.79e-08!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.39e-10,253;CL:0002321,1.61e-07,250;CL:0000223,6.62e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.89e-25!239;DOID:162!1.38e-24!235;DOID:0050687!1.02e-17!143;DOID:305!2.05e-14!106;DOID:0050686!2.29e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.38e-15,239;DOID:162,4.28e-14,235;DOID:0050687,3.00e-11,143;DOID:305,3.19e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.71e-08!238;UBERON:0009142!1.71e-08!238;UBERON:0002100!7.80e-08!216;UBERON:0004921!4.43e-07!129;UBERON:0004185!4.43e-07!129;UBERON:0000077!5.89e-07!130;UBERON:0001007!9.93e-07!155;UBERON:0001555!9.93e-07!155;UBERON:0007026!9.93e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.18e-07,199 | |||
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| ||
|short_description=p2@PDF | |||
}} | }} |
Latest revision as of 14:47, 17 September 2015
Short description: | p2@PDF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDF_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_AF322879_5end |
EntrezGene: | |
HGNC: | 30012 |
UniProt: | Q9HBH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.39e-10 | 253 |
embryonic cell | 1.61e-07 | 250 |
endodermal cell | 6.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.18e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.38e-15 | 239 |
cancer | 4.28e-14 | 235 |
cell type cancer | 3.00e-11 | 143 |
carcinoma | 3.19e-11 | 106 |