FFCP PHASE2:Hg19::chr7:19185475..19185487,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:222894 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16660 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=222894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16660 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96RJ6 | ||
|association_with_transcript=-431bp_to_ENST00000275461,NM_152898,uc003suo.1_5end | |association_with_transcript=-431bp_to_ENST00000275461,NM_152898,uc003suo.1_5end | ||
|cluster_id=chr7:19185475..19185487,- | |cluster_id=chr7:19185475..19185487,- | ||
Latest revision as of 15:01, 17 September 2015
| Short description: | p1@FERD3L |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_FERD3L_5end |
| Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
| Association with transcript: | -431bp_to_ENST00000275461, NM_152898, uc003suo.1_5end |
| EntrezGene: | FERD3L |
| HGNC: | 16660 |
| UniProt: | Q96RJ6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@FERD3L |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 1.77e-10 | 41 |
| neurectodermal cell | 9.44e-08 | 59 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| sympathetic nervous system | 3.49e-79 | 5 |
| autonomic nervous system | 3.49e-79 | 5 |
| peripheral nervous system | 9.75e-45 | 8 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroendocrine tumor | 2.83e-66 | 6 |
| neuroectodermal tumor | 2.00e-40 | 10 |
| germ cell and embryonal cancer | 3.41e-19 | 22 |
| germ cell cancer | 3.41e-19 | 22 |
Showing 1 to 4 of 4 entries
