FFCP PHASE1:Hg19::chr4:38807359..38807364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7096 | |EntrezGene=7096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11847 | |HGNC=11847 | ||
|TSSclassifier=strong | |||
|UniProt=D6RF68 | |UniProt=D6RF68 | ||
|association_with_transcript=-160bp_to_ENST00000508364_5end | |||
|cluster_id=chr4:38807359..38807364,- | |||
|coexpression_cluster_id=C650 | |||
|description=CAGE_peak_6_at_TLR1_5end | |||
|id=chr4:38807359..38807364,- | |||
|ontology_enrichment_celltype=CL:0000945!7.62e-45!24;CL:0000826!7.62e-45!24;CL:0002087!4.32e-40!119;CL:0000738!1.13e-37!140;CL:0002031!1.20e-32!124;CL:0000037!2.77e-28!172;CL:0000566!2.77e-28!172;CL:0000988!4.98e-26!182;CL:0002032!8.07e-26!165;CL:0000837!8.07e-26!165;CL:0000838!1.76e-23!52;CL:0000542!6.50e-23!53;CL:0000051!6.50e-23!53;CL:0000236!1.14e-19!14;CL:0002057!6.39e-19!42;CL:0000860!2.53e-17!45;CL:0000766!2.58e-14!76;CL:0002194!1.74e-13!63;CL:0000576!1.74e-13!63;CL:0000040!1.74e-13!63;CL:0000559!1.74e-13!63;CL:0002009!6.48e-13!65;CL:0000839!1.25e-11!70;CL:0000557!2.14e-11!71;CL:0000134!5.32e-09!358;CL:0002320!1.36e-08!365;CL:0000842!3.26e-08!3;CL:0000763!7.26e-08!112;CL:0000049!7.26e-08!112;CL:0000219!3.60e-07!390;CL:0002393!3.93e-07!9;CL:0002397!3.93e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.07e-76;24!CL:0000236;4.32e-41;13!CL:0000542;5.20e-23;53!CL:0000775;1.77e-15;3!CL:0000946;3.08e-12;1!CL:0000786;3.08e-12;1!CL:0002087;1.06e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.45e-76,24;CL:0000826,6.45e-76,24;CL:0000236,2.05e-49,14;CL:0000838,3.51e-34,52;CL:0000542,1.67e-33,53;CL:0000051,1.67e-33,53;CL:0000738,3.60e-21,136;CL:0002087,1.98e-19,115;CL:0002031,1.52e-18,120;CL:0002032,1.43e-17,161;CL:0000837,1.43e-17,161;CL:0000037,9.40e-17,168;CL:0000988,8.53e-16,177;CL:0000775,1.22e-15,3;CL:0000946,3.45e-12,1;CL:0000786,3.45e-12,1;CL:0000980,3.45e-12,1;CL:0000134,9.52e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;5.20e-23;53!CL:0000954;9.53e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!7.55e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:630;7.02e-13;1!DOID:0050177;7.02e-13;1!DOID:0050427;7.02e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.03e-13,1;DOID:0050177,7.03e-13,1;DOID:0050427,7.03e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.44e-17!102;UBERON:0003061!3.44e-17!102;UBERON:0002193!3.10e-16!112;UBERON:0002371!9.98e-11!80;UBERON:0002405!3.77e-10!115;UBERON:0001474!1.29e-09!86;UBERON:0002106!4.12e-09!3;UBERON:0004854!4.12e-09!3;UBERON:0009034!4.12e-09!3;UBERON:0002095!4.12e-09!3;UBERON:0004782!4.12e-09!3;UBERON:0003281!4.12e-09!3;UBERON:0009664!4.12e-09!3;UBERON:0002296!4.12e-09!3;UBERON:0005602!4.12e-09!3;UBERON:0001179!4.12e-09!3;UBERON:0006293!4.12e-09!3;UBERON:0002384!4.87e-08!375;UBERON:0004765!1.94e-07!101;UBERON:0001434!1.94e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@TLR1 | |||
}} | }} |
Latest revision as of 16:17, 17 September 2015
Short description: | p6@TLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TLR1_5end |
Coexpression cluster: | C650_CD19_B_lymphoma_xeroderma_splenic_Burkitt_plasma |
Association with transcript: | -160bp_to_ENST00000508364_5end |
EntrezGene: | TLR1 |
HGNC: | 11847 |
UniProt: | D6RF68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.45e-76 | 24 |
pro-B cell | 6.45e-76 | 24 |
B cell | 2.05e-49 | 14 |
lymphoid lineage restricted progenitor cell | 3.51e-34 | 52 |
lymphocyte | 1.67e-33 | 53 |
common lymphoid progenitor | 1.67e-33 | 53 |
leukocyte | 3.60e-21 | 136 |
nongranular leukocyte | 1.98e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.52e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.43e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-17 | 161 |
hematopoietic stem cell | 9.40e-17 | 168 |
hematopoietic cell | 8.53e-16 | 177 |
neutrophil | 1.22e-15 | 3 |
antibody secreting cell | 3.45e-12 | 1 |
plasma cell | 3.45e-12 | 1 |
plasmablast | 3.45e-12 | 1 |
mesenchymal cell | 9.52e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.03e-13 | 1 |
monogenic disease | 7.03e-13 | 1 |
xeroderma pigmentosum | 7.03e-13 | 1 |