FFCP PHASE1:Hg19::chr2:15731289..15731298,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:15731289..15731298,+
|short_description=p6@DDX1
|description=CAGE_peak_6_at_DDX1_5end
|association_with_transcript=-3bp_to_ENST00000381341_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1653 | |EntrezGene=1653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2734 | |HGNC=2734 | ||
|TSSclassifier=strong | |||
|UniProt=Q92499 | |UniProt=Q92499 | ||
|association_with_transcript=-3bp_to_ENST00000381341_5end | |||
|cluster_id=chr2:15731289..15731298,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_6_at_DDX1_5end | |||
|id=chr2:15731289..15731298,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.32e-07!5;CL:0000457!1.32e-07!5;CL:0002191!1.32e-07!5;CL:0000097!1.32e-07!5;CL:0000831!1.32e-07!5;CL:0002028!1.32e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001869!2.17e-28!32;UBERON:0001893!1.14e-26!34;UBERON:0002791!9.42e-23!33;UBERON:0002020!4.64e-22!34;UBERON:0003528!4.64e-22!34;UBERON:0002780!6.17e-22!41;UBERON:0001890!6.17e-22!41;UBERON:0006240!6.17e-22!41;UBERON:0003080!2.19e-21!42;UBERON:0000369!2.94e-19!4;UBERON:0002435!2.94e-19!4;UBERON:0000204!2.94e-19!4;UBERON:0010082!2.94e-19!4;UBERON:0001950!1.39e-18!20;UBERON:0000955!1.79e-17!69;UBERON:0006238!1.79e-17!69;UBERON:0002619!6.62e-17!22;UBERON:0001872!1.57e-15!5;UBERON:0001049!2.13e-15!57;UBERON:0005068!2.13e-15!57;UBERON:0006241!2.13e-15!57;UBERON:0007135!2.13e-15!57;UBERON:0000956!7.15e-15!25;UBERON:0000203!7.15e-15!25;UBERON:0002616!7.94e-15!59;UBERON:0001017!2.01e-14!82;UBERON:0000073!2.34e-14!94;UBERON:0001016!2.34e-14!94;UBERON:0003056!2.73e-14!61;UBERON:0005743!1.15e-13!86;UBERON:0000200!9.03e-13!6;UBERON:0005383!4.72e-12!3;UBERON:0005382!4.72e-12!3;UBERON:0009663!2.97e-11!7;UBERON:0001871!4.79e-10!7;UBERON:0001874!8.17e-10!1;UBERON:0003075!1.13e-09!86;UBERON:0007284!1.13e-09!86;UBERON:0001882!1.25e-09!1;UBERON:0005403!1.25e-09!1;UBERON:0007190!2.26e-09!1;UBERON:0002581!2.46e-09!1;UBERON:0002346!3.62e-09!90;UBERON:0000033!5.87e-09!123;UBERON:0002308!7.25e-09!9;UBERON:0002420!7.25e-09!9;UBERON:0000125!7.25e-09!9;UBERON:0007245!7.25e-09!9;UBERON:0010009!7.25e-09!9;UBERON:0010011!7.25e-09!9;UBERON:0000454!7.25e-09!9;UBERON:0000153!1.91e-08!129;UBERON:0007811!1.91e-08!129;UBERON:0004121!3.03e-08!169;UBERON:0000924!5.36e-08!173;UBERON:0006601!5.36e-08!173;UBERON:0007023!6.76e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p6@DDX1 | |||
}} | }} |
Latest revision as of 16:28, 17 September 2015
Short description: | p6@DDX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DDX1_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -3bp_to_ENST00000381341_5end |
EntrezGene: | DDX1 |
HGNC: | 2734 |
UniProt: | Q92499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |