FFCP PHASE1:Hg19::chr2:16081716..16081740,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16911 | |HGNC=16911 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000420452_5end | |association_with_transcript=-12bp_to_ENST00000420452_5end | ||
|cluster_id=chr2:16081716..16081740,- | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_2_at_MYCNOS_5end | |description=CAGE_peak_2_at_MYCNOS_5end | ||
|id=chr2:16081716..16081740,- | |id=chr2:16081716..16081740,- | ||
|ontology_enrichment_celltype=CL:0000039!3.72e-13!7;CL:0000586!3.72e-13!7;CL:0002322!1.39e-12!5;CL:0000047!4.19e-11!8;CL:0000133!8.97e-08!59;CL:0002319!2.96e-07!25;CL:0000540!4.81e-07!6;CL:0000031!4.81e-07!6;CL:0000404!4.81e-07!6 | |ontology_enrichment_celltype=CL:0000039!3.72e-13!7;CL:0000586!3.72e-13!7;CL:0002322!1.39e-12!5;CL:0000047!4.19e-11!8;CL:0000133!8.97e-08!59;CL:0002319!2.96e-07!25;CL:0000540!4.81e-07!6;CL:0000031!4.81e-07!6;CL:0000404!4.81e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.35e-23;5!CL:0002321;2.96e-08;15!CL:0000039;6.08e-08;7!CL:0000586;6.08e-08;7!CL:0000047;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.28e-08,7;CL:0000586,5.28e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.90e-17!22;DOID:2994!1.90e-17!22;DOID:169!7.55e-08!6 | |ontology_enrichment_disease=DOID:3095!1.90e-17!22;DOID:2994!1.90e-17!22;DOID:169!7.55e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.93e-20;22!DOID:2994;3.93e-20;22!DOID:169;8.83e-20;6!DOID:171;4.07e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.21e-20,22;DOID:2994,3.21e-20,22;DOID:169,8.56e-20,6;DOID:171,4.00e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.87e-17!94;UBERON:0001016!4.87e-17!94;UBERON:0001017!3.93e-16!82;UBERON:0005743!4.75e-15!86;UBERON:0001049!2.36e-12!57;UBERON:0005068!2.36e-12!57;UBERON:0006241!2.36e-12!57;UBERON:0007135!2.36e-12!57;UBERON:0001893!1.71e-11!34;UBERON:0001869!1.02e-10!32;UBERON:0002346!1.42e-10!90;UBERON:0002780!2.21e-10!41;UBERON:0001890!2.21e-10!41;UBERON:0006240!2.21e-10!41;UBERON:0002791!2.29e-10!33;UBERON:0003075!2.71e-10!86;UBERON:0007284!2.71e-10!86;UBERON:0003080!4.71e-10!42;UBERON:0003056!4.83e-10!61;UBERON:0002020!4.94e-10!34;UBERON:0003528!4.94e-10!34;UBERON:0002616!3.50e-09!59;UBERON:0000955!3.95e-09!69;UBERON:0006238!3.95e-09!69;UBERON:0000924!2.48e-08!173;UBERON:0006601!2.48e-08!173;UBERON:0000473!3.22e-08!8;UBERON:0004121!4.94e-08!169 | |ontology_enrichment_uberon=UBERON:0000073!4.87e-17!94;UBERON:0001016!4.87e-17!94;UBERON:0001017!3.93e-16!82;UBERON:0005743!4.75e-15!86;UBERON:0001049!2.36e-12!57;UBERON:0005068!2.36e-12!57;UBERON:0006241!2.36e-12!57;UBERON:0007135!2.36e-12!57;UBERON:0001893!1.71e-11!34;UBERON:0001869!1.02e-10!32;UBERON:0002346!1.42e-10!90;UBERON:0002780!2.21e-10!41;UBERON:0001890!2.21e-10!41;UBERON:0006240!2.21e-10!41;UBERON:0002791!2.29e-10!33;UBERON:0003075!2.71e-10!86;UBERON:0007284!2.71e-10!86;UBERON:0003080!4.71e-10!42;UBERON:0003056!4.83e-10!61;UBERON:0002020!4.94e-10!34;UBERON:0003528!4.94e-10!34;UBERON:0002616!3.50e-09!59;UBERON:0000955!3.95e-09!69;UBERON:0006238!3.95e-09!69;UBERON:0000924!2.48e-08!173;UBERON:0006601!2.48e-08!173;UBERON:0000473!3.22e-08!8;UBERON:0004121!4.94e-08!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.35e-23;5!UBERON:0002410;1.35e-23;5!UBERON:0000010;2.13e-13;8!UBERON:0000473;4.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.30e-23,5;UBERON:0002410,1.30e-23,5;UBERON:0000010,2.09e-13,8;UBERON:0000473,4.15e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,2.64342657158052,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89853131913626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.69716365721711,0.518305275076852,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0.399158742865633,0.5745161103971,1.05836791361941,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.99921590399346,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79217710565611,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.628303510868405,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,11.8941765312396,3.98951802167723,0,31.780004713876,0,0,0.247871528518004,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,6.63657169277452,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0.942706188406504,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,2.18175345170189,0,0,0,0,0.126166424835079,1.74824915141913,0,0.815910637935854,1.3360870263278,1.92979289023174,0.50141507858475,0,0.535928260312357,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@MYCNOS | |short_description=p2@MYCNOS | ||
}} | }} |
Latest revision as of 19:23, 17 September 2015
Short description: | p2@MYCNOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYCNOS_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | -12bp_to_ENST00000420452_5end |
EntrezGene: | NA |
HGNC: | 16911 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.28e-08 | 7 |
germ cell | 5.28e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.30e-23 | 5 |
autonomic nervous system | 1.30e-23 | 5 |
peripheral nervous system | 2.09e-13 | 8 |
testis | 4.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.21e-20 | 22 |
germ cell cancer | 3.21e-20 | 22 |
neuroendocrine tumor | 8.56e-20 | 6 |
neuroectodermal tumor | 4.00e-12 | 10 |