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FFCP PHASE1:Hg19::chr6:30881989..30882080,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=57176
|EntrezGene=57176
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=21642
|HGNC=21642
|TSSclassifier=strong
|UniProt=B4DG77,B7ZCJ6
|UniProt=B4DG77,B7ZCJ6
|association_with_transcript=0bp_to_ENST00000413959,ENST00000428017,ENST00000467717,uc003nsd.2,uc011dmx.1,uc011dmy.1_5end
|association_with_transcript=0bp_to_ENST00000413959,ENST00000428017,ENST00000467717,uc003nsd.2,uc011dmx.1,uc011dmy.1_5end
|cluster_id=chr6:30881989..30882080,+
|description=CAGE_peak_1_at_VARS2_5end
|description=CAGE_peak_1_at_VARS2_5end
|id=chr6:30881989..30882080,+
|id=chr6:30881989..30882080,+
|ontology_enrichment_celltype=CL:0000542!2.37e-16!53;CL:0000051!2.37e-16!53;CL:0000838!7.93e-16!52;CL:0000945!3.64e-12!24;CL:0000826!3.64e-12!24
|ontology_enrichment_celltype=CL:0000542!2.37e-16!53;CL:0000051!2.37e-16!53;CL:0000838!7.93e-16!52;CL:0000945!3.64e-12!24;CL:0000826!3.64e-12!24
|ontology_enrichment_celltype_v019=CL:0000945;4.04e-12;24!CL:0000542;1.43e-09;53
|ontology_enrichment_celltype_v019_2=CL:0000542,2.36e-16,53;CL:0000051,2.36e-16,53;CL:0000838,7.91e-16,52;CL:0000945,3.63e-12,24;CL:0000826,3.63e-12,24
|ontology_enrichment_development_v019=CL:0000051;1.43e-09;53
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
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|short_description=p1@VARS2
|short_description=p1@VARS2
}}
}}

Latest revision as of 19:24, 17 September 2015

Short description:p1@VARS2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_VARS2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000413959, ENST00000428017, ENST00000467717, uc003nsd.2, uc011dmx.1, uc011dmy.1_5end
EntrezGene:VARS2
HGNC: 21642
UniProt: B4DG77B7ZCJ6
Genome view:ZENBU


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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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