FFCP PHASE1:Hg19::chr6:30881989..30882080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57176 | |EntrezGene=57176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21642 | |HGNC=21642 | ||
|TSSclassifier=strong | |||
|UniProt=B4DG77,B7ZCJ6 | |UniProt=B4DG77,B7ZCJ6 | ||
|association_with_transcript=0bp_to_ENST00000413959,ENST00000428017,ENST00000467717,uc003nsd.2,uc011dmx.1,uc011dmy.1_5end | |association_with_transcript=0bp_to_ENST00000413959,ENST00000428017,ENST00000467717,uc003nsd.2,uc011dmx.1,uc011dmy.1_5end | ||
|cluster_id=chr6:30881989..30882080,+ | |||
|description=CAGE_peak_1_at_VARS2_5end | |description=CAGE_peak_1_at_VARS2_5end | ||
|id=chr6:30881989..30882080,+ | |id=chr6:30881989..30882080,+ | ||
Latest revision as of 19:24, 17 September 2015
| Short description: | p1@VARS2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_VARS2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000413959, ENST00000428017, ENST00000467717, uc003nsd.2, uc011dmx.1, uc011dmy.1_5end |
| EntrezGene: | VARS2 |
| HGNC: | 21642 |
| UniProt: | B4DG77B7ZCJ6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@VARS2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte | 2.36e-16 | 53 |
| common lymphoid progenitor | 2.36e-16 | 53 |
| lymphoid lineage restricted progenitor cell | 7.91e-16 | 52 |
| lymphocyte of B lineage | 3.63e-12 | 24 |
| pro-B cell | 3.63e-12 | 24 |
Showing 1 to 5 of 5 entries
