FFCP PHASE1:Hg19::chr1:157963160..157963190,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55243 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15734 | |||
|TSSclassifier=strong | |||
|UniProt=Q5W0F9,Q96J84 | |||
|association_with_transcript=97bp_to_ENST00000360089,ENST00000368173,ENST00000392272,NM_018240,uc001frn.3,uc010pib.1_5end | |||
|cluster_id=chr1:157963160..157963190,+ | |||
|description=CAGE_peak_2_at_KIRREL_5end | |||
|id=chr1:157963160..157963190,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.31e-22!180;CL:0002321!3.16e-13!248;CL:0000220!7.06e-13!246;CL:0000057!8.13e-11!75;CL:0000499!1.14e-10!27;CL:0000077!7.35e-09!19;CL:0000222!8.30e-09!119;CL:0000327!1.39e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.40e-11;10!CL:1000494;3.40e-11;10!CL:0000499;7.04e-09;28!CL:0000077;1.01e-08;19!CL:1000497;1.81e-08;17!CL:0002518;1.81e-08;17!CL:1000449;3.65e-08;15!CL:0000327;1.22e-07;15!CL:0000153;1.85e-07;9!CL:0000447;1.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.82e-11,10;CL:1000494,2.82e-11,10;CL:0000499,4.51e-09,28;CL:0000077,5.66e-09,19;CL:1000497,1.65e-08,17;CL:0002518,1.65e-08,17;CL:1000449,3.18e-08,15;CL:0000327,1.18e-07,15;CL:0000153,1.91e-07,9;CL:0000447,1.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.05e-10!365;UBERON:0005256!6.81e-08!143;UBERON:0003914!3.71e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.40e-11;10!UBERON:0009773;3.40e-11;10!UBERON:0001231;3.40e-11;10!UBERON:0004810;3.40e-11;10!UBERON:0006555;3.65e-08;15!UBERON:0004819;3.65e-08;15!UBERON:0001285;3.65e-08;15!UBERON:0007684;3.65e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.82e-11,10;UBERON:0004211,3.18e-08,15;UBERON:0009773,3.18e-08,15;UBERON:0001231,3.18e-08,15;UBERON:0001285,3.18e-08,15;UBERON:0007684,3.18e-08,15;UBERON:0004208,3.18e-08,15;UBERON:0006555,1.61e-07,16;UBERON:0004819,1.61e-07,16;UBERON:0005172,8.22e-07,54;UBERON:0005173,8.22e-07,54 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.845726424575827,0,0.893922188854576,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0.618831764800233,0,1.34465029290355,1.80808358407193,1.46062018077475,0.487932798790507,1.10808952269109,0.408001382488506,1.25381888591235,0.286235987131057,0.821246550437305,1.63205431473244,0,0,0,0,0,0,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.895037932904712,0.722878304769133,3.00802746381534,4.20054904986389,3.1811437882044,3.40644409211845,1.70162670895322,1.33037638477538,0.614843499851882,0.589405839739707,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0.838998872419812,1.10047216776027,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0.732186172644509,0,1.62028389576352,0.446498641420399,0.673588117878509,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0.633152558322899,0.132409180813219,1.72101972449288,1.06400514659507,2.80338800071154,1.06748995729705,0.98667019366864,2.17847724779836,0.538842688278752,0,1.21085942115945,1.15235184896,0.468642863667593,0.312160076830321,0,0.896692083310806,0.469737994575059,0.161872944368132,0.561803226808994,0.408308342509787,0.245668634623536,0.309977343527296,1.18800285728205,2.96720315134268,1.82032272387605,0.718618141816238,0.336672227908132,0.500474079487857,0,0.877955241761676,2.14541457059314,1.80285670687916,0.226864366320042,2.15267562826634,1.92201649936711,1.90738711043606,0.900273288253207,0.618315175430633,1.03056216018252,0.744467425326359,1.85653965465393,0.68205903612839,1.00973509697646,1.74894807420369,1.45481451136931,0.355009592516614,0.906768884048762,0.67824236924195,0.57978255948989,0.818238361772504,0.286804595389004,0.731842236777572,0.927708378250397,0.348581828608555,0.414644220061482,0.252320850875628,0.72995471815166,3.12899064659632,0,0,0.928735856063958,0,0.354920400119532,0.168584690078102,0,0.441175890929576,0,0.237270619111097,0.269662616320329,0.196221465125346,0.769494313892781,0,1.40241773803446,2.057870056657,2.94017422771084,0,0,0,0.441463099414651,0,0.686271241194102,0.658501712451753,0,0.402115889646523,1.01847289674383,0.651616610620649,0,0,0.811512834825538,0.587043471179108,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0.895585227028483,0,1.15014803749563,0,0,0,0,0,0.444485260045183,1.14596527667483,1.17217447210047,0,1.02827492703324,2.10240140490742,0.285826432630578,0.672786506072164,0.87192013766656,0.8800594298514,1.16344544182,0,0.845302752556,1.59562869950922,1.04007436911366,1.02882949704857,0,0,2.14466990487221,2.17048642156577,0,1.30294473717494,0.710783897485092,0,0.602878754119172,2.61460037580088,0.899756920638513,0,0,0,1.19812427745791,1.14861935834114,0,0.579125226670317,0.821905290201534,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.736148950314839,1.00034104211935,0,1.24782516918484,0.713715955188647,0.946214490203608,1.05427273493442,1.20378439891088,2.27407504055985,0,0.664225598535437,0.184369168541703,1.56390506042549,1.17480694477644,0.686286847621712,0,0,0,0,0,0,1.48864684691266,0.920771839728375,0.841980283299221,1.28139149255701,0.511707249066704,0.804269605718038,0,0.925258162815933,1.9531789784444,0.410635780069046,0.519254429183621,0.348631135379878,0.362578348774867,0.802025881213139,0,0.574072240823034,0.910455840033585,1.04899531967539,2.70719767744447,2.46449078734127,6.27479815341484,2.92278449306521,4.74982330017941,0,0,2.37507507712353,0,7.85744668877173,11.5388647986616,3.82314409567557,0.831076008928724,11.1937377361089,0,0,0.512900250232778,1.31205858279882,0.325378394664303,0.721287081534056,1.09883357782012,1.07262349896764,1.72279661398852,2.60024098414608,3.21367859688319,1.64340221096607,0.154048617114644,0,0.413509717453592,0.537101224341368,0.580066775656914,0.255679882248303,1.60257664164127,0.165284915360978,0.384380134730212,1.14851441245126,0.4046311234222,0.464845549297286,1.88887408098384,0.6970372701606,0.924100740528266,1.59691809095107,0.869932992075073,1.11194531462352,0.429374660225974,0.744316738719335,1.2655176988749,0.571890581771475,0.511795582622668,0,1.90921948755562,1.56989728039846,0.719489830333259,0.823611089208164,0.706874414074119,1.2130948894399,0,0,0,0.974853958525138,0,0.682499557039929,0.424216295861138,1.13008116620243,1.65409603063837,0,0.438450885253763,0,0.655894752046633,1.01455188481352,0.92947049429925,0,1.00387946542836,0.785992328104969,0.35667105148125,0,2.32218398827431,2.96365403663912,0.75894634753143,0,1.15466535270614,0.670302275535787,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0.640276590135727,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,6.75601306009579,0.996239941255349,0.828851746593443,0,1.32949287252801,0,0.311039587661807,0.718946809178615,0,0,0.493217028184668,0,2.22273980289274,0.969332746095218,0.185536196323703,0,0,0,0,0.341380344856499,0,0,0,1.16641845353302,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0,0,0.139423744278603,0.769502585037971,1.93701494939902,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,1.05499032264014,0.489698424477443,0.141353071433941,0,0.995261931078505,0.176915129006678,0,0,0,0.104421949505455,0,0,0,0,0,0.971121518136371,0,0,1.22429104652196,1.89559738885464,0,0,0,0.330991955875499,0.313932918407225,0,2.84609546029793,1.38674673013139,0.347119476670262,0.195984794828755,0.0870592065804026,0.17472666824203,2.23581842213102,0.0967563312890851,0.0730893170861856,0.328461828212837,0.193978032976839,4.05978182780901,1.12990370390266,0.137041924646751,0.794858446811959,0,0,0.64127056201227,1.28071796843612,1.59847687665704,0,0,0,0,1.61528296235062,0.471388069233591,2.31037150325144,1.46443984837266,1.32597682927218,1.15580235960608,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,1.14580212005842,0.717873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.53746777989381,1.44119953416961,0,0,0,0.0674035438541849,0.590564889088493,0,0,0.272406812223151,0,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0.335434687599266,0.709251365692784,3.82918493385486,1.6896053843105,0,0,0,0,0.25426853765475,0,0.864221491201268,0.979762080328227,1.19730191562487,0.082092520749339,0.511164065356265,0.679872549120754,0.439656701034247,0,0,0,0.513260513652988,0,0.640724475406168,0.943225830597996,0,0.496166021811951,0,0,0,0.544017803369474,0.7520696820681,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.496771223531068,1.24513771442608,0.874862855734746,5.30771911395767,1.14186133417987,0,0,0,0.895528817321244,1.8697064787778,0,0.947015026375446,1.50940741051545,1.77962244319307,0.228840068396924,0.453692771289717,1.24349760466224,1.62640664988597,1.27437413730962,1.79921244865442,1.70789252563885,0,1.06336685823198,0,1.35231848097497,1.90402606084398,0.813741466409323,2.18218391043071,1.39633724155235,0.928067519756987,0.796191777397232,2.00013882331577,1.37358282073117,2.02049693259551,3.78554694685953,1.34833881285112,2.35885750512418,3.39292579554775,1.36023555307363,1.85217979459067,0.489473409012935,0.71635536432595,4.01441881309264,2.19284049578707,0.706756583783524,1.3503982678964,1.68942440653073,9.22469466916608,3.10887307558079,0.607719912354764,0.138258436151731,0,0,0.163565394255844,1.63804924423206,0.245772908753719,0.211312123358627,0,0,0,0,3.68211900503681,0.419638523158333,0.622077260032973,0.383683113910955,0,0.314531883711793,0.109209638192014,0.678930119816101,0.850299680406731,2.97445834221605,1.11728983594649,0,0.157723490002507,0,0,1.2249819094128,0.256916900385838,0,0,0,1.00828678488687,0.138314504928436,0,0,0.0981477185010256,0.11796972334774,0.550285795565037,0.115525666150338,2.66967466827017,0,1.39241355481392,1.0529445968896,0.20170506870352,0,0,1.63771917510097,0,0,0,0,0.0634158101939068,0,0,1.98484471355718,0,0.511049710558381,0,0,0,0.227662191351298,0.443511850813194,0,3.60124819818579,0.271878931907327,0.263091094251396,0.472775363535873,0.222462803784138,0.39246546425257,0.157115589916002,0,2.73947616152849,3.0229862770607,0,0.78624198594322,0.158013611732727,1.74362138052188,0.521574816907738,0.801711364730253,0.828864656652147,0.6828739083758,0.691259661814092,0,0.591660003652827,0.766920642832419,0,0.68732060563215,1.5510319283216,0.955538938977433,0.447421727191169,0,0,0,0.307988420568741,1.1598144313382,0.971421986118279,0,0.397901550322736,0,0,0.219881033490858,0,0.231522474323834,0.655678681511872,0,0.980593287015622,0,0.588925401344836,0,1.6906229103336,0.849635573439084,0.375935671919414,1.28915775947154,0,0,1.41157948686277,0,0,0.458729283404541,0.430018749454354,0.631086248772738,0.0679914901909147,0.872701380680755,1.5870805215462,1.48798007266701,1.84870251452567,0.432626562123789,0.504665699340316,0.218531143927391,0.253397002022874,0.509944148709909,0,0.551369397209069,0.250707539292375,0.606229585745915,0.535928260312357,0,0.20686599172379,0.213233981900981,0.714193294391221,0.258355639344024,0.186224142887574,0.784923038064294,0.445530107947154,0.202117188958219,0.653150243690884,0.342233301085281,0.471464371102113,0.502055437748735,0,0.407016343054873,1.49418284228802,1.9307228228694,1.52702843581198,0,0.977931553462932,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p2@KIRREL | |||
}} |
Latest revision as of 19:55, 17 September 2015
Short description: | p2@KIRREL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIRREL_5end |
Coexpression cluster: | NA |
Association with transcript: | 97bp_to_ENST00000360089, ENST00000368173, ENST00000392272, NM_018240, uc001frn.3, uc010pib.1_5end |
EntrezGene: | KIRREL |
HGNC: | 15734 |
UniProt: | Q5W0F9Q96J84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.82e-11 | 10 |
nephron tubule epithelial cell | 2.82e-11 | 10 |
stromal cell | 4.51e-09 | 28 |
mesothelial cell | 5.66e-09 | 19 |
kidney cell | 1.65e-08 | 17 |
kidney epithelial cell | 1.65e-08 | 17 |
epithelial cell of nephron | 3.18e-08 | 15 |
extracellular matrix secreting cell | 1.18e-07 | 15 |
GAG secreting cell | 1.91e-07 | 9 |
carbohydrate secreting cell | 1.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.82e-11 | 10 |
nephron epithelium | 3.18e-08 | 15 |
renal tubule | 3.18e-08 | 15 |
nephron tubule | 3.18e-08 | 15 |
nephron | 3.18e-08 | 15 |
uriniferous tubule | 3.18e-08 | 15 |
nephrogenic mesenchyme | 3.18e-08 | 15 |
excretory tube | 1.61e-07 | 16 |
kidney epithelium | 1.61e-07 | 16 |
abdomen element | 8.22e-07 | 54 |
abdominal segment element | 8.22e-07 | 54 |