FFCP PHASE1:Hg19::chr5:37840160..37840165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2668 | |EntrezGene=2668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4232 | |HGNC=4232 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-372bp_to_ENST00000515058_5end | |association_with_transcript=-372bp_to_ENST00000515058_5end | ||
|cluster_id=chr5:37840160..37840165,- | |||
|coexpression_cluster_id=C152 | |coexpression_cluster_id=C152 | ||
|description=CAGE_peak_6_at_GDNF_5end | |description=CAGE_peak_6_at_GDNF_5end | ||
|id=chr5:37840160..37840165,- | |id=chr5:37840160..37840165,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!4.06e-12!1 | |ontology_enrichment_disease=DOID:6193!4.06e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.10e-50;4!UBERON:0000923;3.10e-50;4!UBERON:0010316;3.10e-50;4!UBERON:0005291;3.10e-50;4!UBERON:0002050;1.48e-40;5!UBERON:0005423;1.48e-40;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p6@GDNF | |short_description=p6@GDNF | ||
}} | }} |
Latest revision as of 20:09, 17 September 2015
Short description: | p6@GDNF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GDNF_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -372bp_to_ENST00000515058_5end |
EntrezGene: | GDNF |
HGNC: | 4232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |