FFCP PHASE1:Hg19::chr4:42154275..42154297,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389206 | |EntrezGene=389206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23815 | |HGNC=23815 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=95bp_to_uc011byy.1_5end | |association_with_transcript=95bp_to_uc011byy.1_5end | ||
|cluster_id=chr4:42154275..42154297,- | |||
|coexpression_cluster_id=C4414 | |||
|description=CAGE_peak_3_at_BEND4_5end | |description=CAGE_peak_3_at_BEND4_5end | ||
|id=chr4:42154275..42154297,- | |id=chr4:42154275..42154297,- | ||
|ontology_enrichment_celltype=CL:0002322!1.01e-07!5;CL:0000047!3.05e-07!8;CL:0000945!3.80e-07!24;CL:0000826!3.80e-07!24;CL:0000540!4.66e-07!6;CL:0000031!4.66e-07!6;CL:0000404!4.66e-07!6;CL:0002319!8.41e-07!25 | |ontology_enrichment_celltype=CL:0002322!1.01e-07!5;CL:0000047!3.05e-07!8;CL:0000945!3.80e-07!24;CL:0000826!3.80e-07!24;CL:0000540!4.66e-07!6;CL:0000031!4.66e-07!6;CL:0000404!4.66e-07!6;CL:0002319!8.41e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.72e-10;13!CL:0000945;1.58e-09;24!CL:0000540;5.61e-08;6!CL:0000404;5.61e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.12e-10,8;CL:0000945,1.65e-09,24;CL:0000826,1.65e-09,24;CL:0000236,4.46e-09,14;CL:0000540,5.09e-08,6;CL:0000031,5.09e-08,6;CL:0000404,5.09e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.49e-08;10!UBERON:0005564;3.49e-08;10!CL:0000031;5.61e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.97e-19!94;UBERON:0001016!4.97e-19!94;UBERON:0001017!1.32e-18!82;UBERON:0005743!3.13e-18!86;UBERON:0000956!3.81e-17!25;UBERON:0000203!3.81e-17!25;UBERON:0001893!1.02e-16!34;UBERON:0001869!1.22e-16!32;UBERON:0002791!8.35e-16!33;UBERON:0002780!1.84e-15!41;UBERON:0001890!1.84e-15!41;UBERON:0006240!1.84e-15!41;UBERON:0002020!2.02e-15!34;UBERON:0003528!2.02e-15!34;UBERON:0003080!6.27e-15!42;UBERON:0000955!1.60e-14!69;UBERON:0006238!1.60e-14!69;UBERON:0002619!2.10e-14!22;UBERON:0001049!3.32e-13!57;UBERON:0005068!3.32e-13!57;UBERON:0006241!3.32e-13!57;UBERON:0007135!3.32e-13!57;UBERON:0002616!1.71e-12!59;UBERON:0001950!3.14e-12!20;UBERON:0003056!3.66e-11!61;UBERON:0003075!5.49e-10!86;UBERON:0007284!5.49e-10!86;UBERON:0002346!7.37e-10!90;UBERON:0007023!5.01e-09!115;UBERON:0000924!1.08e-07!173;UBERON:0006601!1.08e-07!173;UBERON:0004121!1.15e-07!169;UBERON:0000153!5.30e-07!129;UBERON:0007811!5.30e-07!129;UBERON:0000473!6.86e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@BEND4 | |short_description=p3@BEND4 | ||
}} | }} |
Latest revision as of 20:10, 17 September 2015
Short description: | p3@BEND4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BEND4_5end |
Coexpression cluster: | C4414_chronic_smallcell_neuroblastoma_testis_iPS_testicular_acute |
Association with transcript: | 95bp_to_uc011byy.1_5end |
EntrezGene: | BEND4 |
HGNC: | 23815 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.12e-10 | 8 |
lymphocyte of B lineage | 1.65e-09 | 24 |
pro-B cell | 1.65e-09 | 24 |
B cell | 4.46e-09 | 14 |
neuron | 5.09e-08 | 6 |
neuroblast | 5.09e-08 | 6 |
electrically signaling cell | 5.09e-08 | 6 |