FFCP PHASE1:Hg19::chr3:24231794..24231799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7068 | |EntrezGene=7068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11799 | |HGNC=11799 | ||
|TSSclassifier=strong | |||
|UniProt=B6ZGR7 | |UniProt=B6ZGR7 | ||
|association_with_transcript=27bp_to_AB307687_5end | |association_with_transcript=27bp_to_AB307687_5end | ||
|cluster_id=chr3:24231794..24231799,- | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_38_at_THRB_5end | |description=CAGE_peak_38_at_THRB_5end | ||
|id=chr3:24231794..24231799,- | |id=chr3:24231794..24231799,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.74e-50;2!UBERON:0005062;7.14e-26;4!UBERON:0007284;7.14e-26;4!UBERON:0004872;1.65e-15;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!1.49e-38!3;UBERON:0009751!1.49e-38!3;UBERON:0000946!1.49e-38!3;UBERON:0002523!1.49e-38!3;UBERON:0005983!1.49e-38!3;UBERON:0002165!1.49e-38!3;UBERON:0002062!1.49e-38!3;UBERON:0007280!1.49e-38!3;UBERON:0002146!9.99e-30!1;UBERON:0005623!9.99e-30!1;UBERON:0002135!2.37e-29!1;UBERON:0002133!2.05e-15!2;UBERON:0002771!1.09e-10!3;UBERON:0002342!4.21e-09!14;UBERON:0005062!4.21e-09!14;UBERON:0001981!4.53e-08!60;UBERON:0007500!4.53e-08!60;UBERON:0004537!4.53e-08!60;UBERON:0006965!4.53e-08!60;UBERON:0000055!4.54e-07!69;UBERON:0002021!5.38e-07!5 | |ontology_enrichment_uberon=UBERON:0003978!1.49e-38!3;UBERON:0009751!1.49e-38!3;UBERON:0000946!1.49e-38!3;UBERON:0002523!1.49e-38!3;UBERON:0005983!1.49e-38!3;UBERON:0002165!1.49e-38!3;UBERON:0002062!1.49e-38!3;UBERON:0007280!1.49e-38!3;UBERON:0002146!9.99e-30!1;UBERON:0005623!9.99e-30!1;UBERON:0002135!2.37e-29!1;UBERON:0002133!2.05e-15!2;UBERON:0002771!1.09e-10!3;UBERON:0002342!4.21e-09!14;UBERON:0005062!4.21e-09!14;UBERON:0001981!4.53e-08!60;UBERON:0007500!4.53e-08!60;UBERON:0004537!4.53e-08!60;UBERON:0006965!4.53e-08!60;UBERON:0000055!4.54e-07!69;UBERON:0002021!5.38e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;2.55e-98;1!UBERON:0005623;2.55e-98;1!UBERON:0003978;5.96e-34;3!UBERON:0000946;5.96e-34;3!UBERON:0010313;3.02e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.55e-98,1;UBERON:0005623,2.55e-98,1;UBERON:0003978,5.96e-34,3;UBERON:0009751,5.96e-34,3;UBERON:0000946,5.96e-34,3;UBERON:0002523,5.96e-34,3;UBERON:0005983,5.96e-34,3;UBERON:0002165,5.96e-34,3;UBERON:0002062,5.96e-34,3;UBERON:0007280,5.96e-34,3;UBERON:0004797,1.91e-15,7;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0005062,3.02e-11,10;UBERON:0007500,5.66e-08,59;UBERON:0001981,5.66e-08,59;UBERON:0004537,5.66e-08,59;UBERON:0006965,5.66e-08,59;UBERON:0000055,4.47e-07,68 | |||
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|short_description=p38@THRB | |short_description=p38@THRB | ||
}} | }} |
Latest revision as of 20:10, 17 September 2015
Short description: | p38@THRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_THRB_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | 27bp_to_AB307687_5end |
EntrezGene: | THRB |
HGNC: | 11799 |
UniProt: | B6ZGR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.55e-98 | 1 |
semi-lunar valve | 2.55e-98 | 1 |
valve | 5.96e-34 | 3 |
cardiac mesenchyme | 5.96e-34 | 3 |
cardial valve | 5.96e-34 | 3 |
tunica intima | 5.96e-34 | 3 |
heart layer | 5.96e-34 | 3 |
endocardium | 5.96e-34 | 3 |
endocardial cushion | 5.96e-34 | 3 |
presumptive endocardium | 5.96e-34 | 3 |
blood vessel layer | 1.91e-15 | 7 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
epithelial tube open at both ends | 5.66e-08 | 59 |
blood vessel | 5.66e-08 | 59 |
blood vasculature | 5.66e-08 | 59 |
vascular cord | 5.66e-08 | 59 |
vessel | 4.47e-07 | 68 |