FFCP PHASE1:Hg19::chr3:28283253..28283264,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:28283253..28283264,+ to FFCP PHASE1:Hg19::chr3:28283253..28283264,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152100 | |EntrezGene=152100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28783 | |HGNC=28783 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z7K0 | |UniProt=Q7Z7K0 | ||
|association_with_transcript=129bp_to_NM_182523,uc003cea.2_5end | |||
|cluster_id=chr3:28283253..28283264,+ | |||
|description=CAGE_peak_4_at_CMC1_5end | |||
|id=chr3:28283253..28283264,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.61e-09;7!CL:0000586;7.61e-09;7!CL:0000540;1.75e-07;6!CL:0000404;1.75e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.48e-09,7;CL:0000586,3.48e-09,7;CL:0000540,9.06e-08,6;CL:0000031,9.06e-08,6;CL:0000404,9.06e-08,6;CL:0000542,3.34e-07,53;CL:0000051,3.34e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000031;1.75e-07;6 | |||
|ontology_enrichment_disease=DOID:14566!1.17e-20!239;DOID:162!6.87e-20!235;DOID:2531!2.56e-11!51;DOID:0060083!2.56e-11!51;DOID:0050686!7.87e-11!137;DOID:0050687!1.55e-10!143;DOID:3095!4.23e-10!22;DOID:2994!4.23e-10!22;DOID:1240!1.34e-08!39;DOID:8692!4.15e-07!31;DOID:305!7.72e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.02e-14;22!DOID:2994;1.02e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.66e-15,22;DOID:2994,4.66e-15,22;DOID:162,1.99e-09,235;DOID:14566,5.08e-09,239;DOID:2531,9.85e-07,51;DOID:0060083,9.85e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.08e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.57e-08,8 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,0,0,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0,0.492484232307152,0.612002073732759,0.626909442956176,0.286235987131057,0.547497700291537,0.502170558379211,1.06978768047132,1.64201178899891,1.18066171970519,0,0,0,0,0,0,0.232401601740905,0.710846162437108,1.17440175733939,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,1.28019066769952,0,0.574752439954483,1.32208974556972,0,0,0,0,0,0,1.05353633910031,0.196709770113833,0,0,0.334372990781356,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0,0.328875809207352,0.552700035571697,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0.766440987203842,0,0.506039384039006,0.318565414324097,1.95325036156926,1.90090408889675,0.150575119077773,0.639933055772092,1.24930726552346,1.4206635122641,0,0,1.33720097891754,0.579297615531196,2.43806866313962,0,0,0,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0.221729397462564,0.175669571386252,0.458426764241994,0,0.370784442784429,0,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0.550236083880135,0.626984899610432,1.03366703667732,0,0,0.805658634218294,0,0,0,0,0.267899184852239,0.898117490504679,0.450445921933289,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.404132016209064,0.163461903113459,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0.352303495931295,0.323745888736263,0.421352420106746,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0,0.612975591598039,0.150238058906597,0,0.358779271377724,0,0,0,0.206105058476878,0,0.558350568994769,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0,0.169560592310488,0.193260853163297,0,0.286804595389004,1.21973706129595,0.530119073285941,1.04574548582567,1.24393266018445,0.504641701751257,2.91981887260664,0,0,0,1.39310378409594,0.721879481669586,0.236613600079688,0.674338760312407,0.241011029883482,0.882351781859152,0.217879444092406,0.237270619111097,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0.590789906681404,1.7658523976586,0.245976877086227,0.171567810298526,0,0,0.402115889646523,0.0925884451585296,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0.462985512576611,0.761016608938393,0.790204397959275,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0.288239906833923,0.37872730027914,0.253991577168676,0,0,0,0.308482478109971,0.600686115687835,0.857479297891735,0,0.43596006883328,0.1466765716419,0,0,0,0.26593811658487,0,0,1.41849132023278,0,0,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0.410952645100767,0,0.784596007954691,0.591092280605782,0.431255149719035,0.385029108839245,0,0,1.54657762555539,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,1.03473071292505,0,0.553107505625109,0.260650843404249,0.391602314925481,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.462629081407967,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.846016147141356,0.40101294060657,0.276242966807689,0.229628896329213,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0.325378394664303,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0.193341436584244,0.462145851343933,0.921022048356777,0.827019434907183,0.537101224341368,0.290033387828457,0.170453254832202,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0.563391205064483,0,0,0,0.354761064070598,0,0.658589785919804,0.379473173765715,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.961416640147258,0,0.245040215981032,1.67222857613147,0.432807638929335,0.213425530045242,0.956557636372934,1.99579371432817,0.191505370132367,0.211673582723883,3.57084134302011,0,1.36940807419915,0.626719583092093,0,1.35433422241283,0.321176150207399,0.80719882876419,1.70338495076131,0,0.614481528616916,0.894704431569664,1.00109485027145,0.390776190804081,0.835218521685727,1.23087398947712,0.270455678475983,0.66614393599564,0,0,0.146508179271894,0.242721043499027,0,0.852408440419239,0,0,0,0,0,0.111308705022906,1.48323486804084,3.80025734630388,0,0.552567831062295,1.76352923497993,0.102268682502155,0.492339221844278,0,0.179736702294654,0.179021174675609,0.511572370226872,0.29593021691080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| ||
|short_description=p4@CMC1 | |||
}} | }} |
Latest revision as of 21:26, 17 September 2015
Short description: | p4@CMC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CMC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_NM_182523, uc003cea.2_5end |
EntrezGene: | CMC1 |
HGNC: | 28783 |
UniProt: | Q7Z7K0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.48e-09 | 7 |
germ cell | 3.48e-09 | 7 |
neuron | 9.06e-08 | 6 |
neuroblast | 9.06e-08 | 6 |
electrically signaling cell | 9.06e-08 | 6 |
lymphocyte | 3.34e-07 | 53 |
common lymphoid progenitor | 3.34e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
testis | 7.57e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.66e-15 | 22 |
germ cell cancer | 4.66e-15 | 22 |
cancer | 1.99e-09 | 235 |
disease of cellular proliferation | 5.08e-09 | 239 |
hematologic cancer | 9.85e-07 | 51 |
immune system cancer | 9.85e-07 | 51 |