FFCP PHASE1:Hg19::chr15:49255569..49255578,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399694 | |EntrezGene=399694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16743 | |HGNC=16743 | ||
|TSSclassifier=strong | |||
|UniProt=Q6S5L8 | |UniProt=Q6S5L8 | ||
|association_with_transcript=62bp_to_ENST00000332408,NM_203349,uc001zxb.1_5end | |association_with_transcript=62bp_to_ENST00000332408,NM_203349,uc001zxb.1_5end | ||
|cluster_id=chr15:49255569..49255578,- | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_20_at_SHC4_5end | |description=CAGE_peak_20_at_SHC4_5end | ||
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|ontology_enrichment_celltype=CL:0000148!2.84e-15!10;CL:0000541!2.84e-15!10;CL:0000147!7.68e-11!14;CL:0000333!5.60e-10!41;CL:0002573!7.42e-09!2;CL:0000710!1.66e-07!20;CL:0002566!3.02e-07!1 | |ontology_enrichment_celltype=CL:0000148!2.84e-15!10;CL:0000541!2.84e-15!10;CL:0000147!7.68e-11!14;CL:0000333!5.60e-10!41;CL:0002573!7.42e-09!2;CL:0000710!1.66e-07!20;CL:0002566!3.02e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.78e-29;7!CL:0000126;1.78e-29;7!CL:0000127;1.78e-29;7!CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |ontology_enrichment_celltype_v019=CL:0000128;1.78e-29;7!CL:0000126;1.78e-29;7!CL:0000127;1.78e-29;7!CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.78e-29,7;CL:0000126,1.78e-29,7;CL:0000127,1.78e-29,7;CL:0002453,1.78e-29,7;CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15 | |ontology_enrichment_development_v019=UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11 | |ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,6.76e-18,11 | |||
|ontology_enrichment_uberon=UBERON:0000956!2.13e-07!25;UBERON:0000203!2.13e-07!25;UBERON:0002902!5.19e-07!1;UBERON:0009899!5.19e-07!1;UBERON:0002581!5.50e-07!1;UBERON:0002363!6.20e-07!1;UBERON:0007647!6.20e-07!1;UBERON:0010115!6.20e-07!1;UBERON:0002022!7.40e-07!1 | |ontology_enrichment_uberon=UBERON:0000956!2.13e-07!25;UBERON:0000203!2.13e-07!25;UBERON:0002902!5.19e-07!1;UBERON:0009899!5.19e-07!1;UBERON:0002581!5.50e-07!1;UBERON:0002363!6.20e-07!1;UBERON:0007647!6.20e-07!1;UBERON:0010115!6.20e-07!1;UBERON:0002022!7.40e-07!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p20@SHC4 | |short_description=p20@SHC4 | ||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p20@SHC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SHC4_5end |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | 62bp_to_ENST00000332408, NM_203349, uc001zxb.1_5end |
EntrezGene: | SHC4 |
HGNC: | 16743 |
UniProt: | Q6S5L8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.78e-29 | 7 |
macroglial cell | 1.78e-29 | 7 |
astrocyte | 1.78e-29 | 7 |
oligodendrocyte precursor cell | 1.78e-29 | 7 |
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.76e-18 | 11 |