FFCP PHASE1:Hg19::chr8:32471951..32471956,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3084 | |EntrezGene=3084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |HGNC=7997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000522569_5end | |association_with_transcript=58bp_to_ENST00000522569_5end | ||
|cluster_id=chr8:32471951..32471956,+ | |||
|description=CAGE_peak_44_at_NRG1_5end | |description=CAGE_peak_44_at_NRG1_5end | ||
|id=chr8:32471951..32471956,+ | |id=chr8:32471951..32471956,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.05e-47!42;CL:0000860!5.50e-44!45;CL:0002194!9.86e-30!63;CL:0000576!9.86e-30!63;CL:0000040!9.86e-30!63;CL:0000559!9.86e-30!63;CL:0002009!1.04e-28!65;CL:0000766!6.73e-27!76;CL:0000839!2.11e-26!70;CL:0000557!5.57e-26!71;CL:0002087!2.11e-19!119;CL:0000738!1.38e-17!140;CL:0000763!5.61e-17!112;CL:0000049!5.61e-17!112;CL:0002031!1.24e-16!124;CL:0000037!1.89e-13!172;CL:0000566!1.89e-13!172;CL:0002032!8.10e-13!165;CL:0000837!8.10e-13!165;CL:0000988!1.88e-12!182;CL:0002393!1.24e-10!9;CL:0002397!1.24e-10!9 | |ontology_enrichment_celltype=CL:0002057!2.05e-47!42;CL:0000860!5.50e-44!45;CL:0002194!9.86e-30!63;CL:0000576!9.86e-30!63;CL:0000040!9.86e-30!63;CL:0000559!9.86e-30!63;CL:0002009!1.04e-28!65;CL:0000766!6.73e-27!76;CL:0000839!2.11e-26!70;CL:0000557!5.57e-26!71;CL:0002087!2.11e-19!119;CL:0000738!1.38e-17!140;CL:0000763!5.61e-17!112;CL:0000049!5.61e-17!112;CL:0002031!1.24e-16!124;CL:0000037!1.89e-13!172;CL:0000566!1.89e-13!172;CL:0002032!8.10e-13!165;CL:0000837!8.10e-13!165;CL:0000988!1.88e-12!182;CL:0002393!1.24e-10!9;CL:0002397!1.24e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-13;33!CL:0002057;2.53e-13;33!CL:0000576;7.18e-10;48!CL:0000473;1.92e-09;39!CL:0000234;1.92e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.56e-11,42;CL:0002057,1.56e-11,42;CL:0000473,3.32e-10,48;CL:0000234,3.32e-10,48;CL:0002194,2.45e-08,59;CL:0000576,2.45e-08,59;CL:0000040,2.45e-08,59;CL:0000559,2.45e-08,59;CL:0002009,4.28e-08,61;CL:0000839,1.49e-07,66;CL:0000557,1.88e-07,67;CL:0000766,5.36e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.27e-37!102;UBERON:0003061!8.27e-37!102;UBERON:0002193!4.40e-33!112;UBERON:0002371!1.21e-22!80;UBERON:0001474!8.36e-21!86;UBERON:0002405!3.89e-20!115;UBERON:0004765!3.76e-17!101;UBERON:0001434!3.76e-17!101;UBERON:0003081!1.18e-14!216;UBERON:0000178!6.68e-10!15;UBERON:0000179!6.68e-10!15;UBERON:0000463!6.68e-10!15;UBERON:0002204!7.49e-09!167;UBERON:0004177!9.89e-08!7;UBERON:0002171!2.67e-07!1;UBERON:0006518!2.67e-07!1;UBERON:0008949!2.67e-07!1;UBERON:0000101!2.67e-07!1;UBERON:0002167!2.67e-07!1;UBERON:0001154!3.62e-07!1;UBERON:0001153!3.62e-07!1 | |ontology_enrichment_uberon=UBERON:0002390!8.27e-37!102;UBERON:0003061!8.27e-37!102;UBERON:0002193!4.40e-33!112;UBERON:0002371!1.21e-22!80;UBERON:0001474!8.36e-21!86;UBERON:0002405!3.89e-20!115;UBERON:0004765!3.76e-17!101;UBERON:0001434!3.76e-17!101;UBERON:0003081!1.18e-14!216;UBERON:0000178!6.68e-10!15;UBERON:0000179!6.68e-10!15;UBERON:0000463!6.68e-10!15;UBERON:0002204!7.49e-09!167;UBERON:0004177!9.89e-08!7;UBERON:0002171!2.67e-07!1;UBERON:0006518!2.67e-07!1;UBERON:0008949!2.67e-07!1;UBERON:0000101!2.67e-07!1;UBERON:0002167!2.67e-07!1;UBERON:0001154!3.62e-07!1;UBERON:0001153!3.62e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0002193,4.22e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0,0.689491361473237,0,0,0.376484679085209,0.545812300115692,0,0,1.28371610830437,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0.209658645508376,3.59451619668784,1.35159203557356,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,1.23408681925858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0,0.689491361473237,0,0,0.376484679085209,0.545812300115692,0,0,1.28371610830437,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0.209658645508376,3.59451619668784,1.35159203557356,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,1.23408681925858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p44@NRG1 | |short_description=p44@NRG1 | ||
}} | }} |
Latest revision as of 00:36, 18 September 2015
Short description: | p44@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_44_at_NRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000522569_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.56e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-11 | 42 |
defensive cell | 3.32e-10 | 48 |
phagocyte | 3.32e-10 | 48 |
monopoietic cell | 2.45e-08 | 59 |
monocyte | 2.45e-08 | 59 |
monoblast | 2.45e-08 | 59 |
promonocyte | 2.45e-08 | 59 |
macrophage dendritic cell progenitor | 4.28e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.49e-07 | 66 |
granulocyte monocyte progenitor cell | 1.88e-07 | 67 |
myeloid leukocyte | 5.36e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
hemolymphoid system | 4.22e-08 | 108 |