FFCP PHASE1:Hg19::chr2:66662396..66662407,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:66662396..66662407,+ to FFCP PHASE1:Hg19::chr2:66662396..66662407,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4211 | |EntrezGene=4211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7000 | |HGNC=7000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=95bp_to_ENST00000491706_5end | |||
|cluster_id=chr2:66662396..66662407,+ | |||
|coexpression_cluster_id=C1912 | |||
|description=CAGE_peak_4_at_MEIS1_5end | |||
|id=chr2:66662396..66662407,+ | |||
|ontology_enrichment_celltype=CL:0000192!3.35e-10!42;CL:0000514!3.35e-10!42;CL:0000187!5.03e-08!54;CL:0000680!8.94e-08!57;CL:0000056!8.94e-08!57;CL:0000355!8.94e-08!57;CL:0000183!1.78e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;4.83e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.23e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.81e-12!365;UBERON:0000481!1.77e-11!347;UBERON:0000468!6.00e-11!659;UBERON:0007023!4.45e-09!115;UBERON:0002385!2.21e-08!63;UBERON:0001015!2.21e-08!63;UBERON:0000383!2.21e-08!63;UBERON:0001134!6.98e-08!61;UBERON:0002036!6.98e-08!61;UBERON:0003082!6.98e-08!61;UBERON:0000467!1.76e-07!625;UBERON:0004290!1.94e-07!70;UBERON:0000480!2.43e-07!626;UBERON:0000486!3.29e-07!82;UBERON:0004111!6.58e-07!241;UBERON:0000477!8.04e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;5.78e-08;6!UBERON:0003293;5.78e-08;6!UBERON:0003294;5.78e-08;6!UBERON:0010047;5.78e-08;6!UBERON:0003408;5.78e-08;6!UBERON:0000167;5.78e-08;6!UBERON:0004732;3.99e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.41e-08,6;UBERON:0003293,3.41e-08,6;UBERON:0003294,3.41e-08,6;UBERON:0010047,3.41e-08,6;UBERON:0000167,3.41e-08,6;UBERON:0004732,6.12e-07,13;UBERON:0000013,7.10e-07,5;UBERON:0002410,7.10e-07,5 | |||
|phase1_expression=0.181678379270557,0.642301571672949,1.55049844505568,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0.737201809504527,0,0.873765488520689,0.527533956456907,0.37129905888014,0.331397375727916,3.36162573225888,0.602694528023977,0.730310090387373,1.95173119516203,0.61560529038394,0.204000691244253,1.56727360739044,1.43117993565528,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,3.11964896641424,1.10864698731282,4.0404001418838,1.24430121722827,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,1.01304409331664,4.50191214764944,4.30254931123221,2.83734705758686,1.12135520028461,2.1349799145941,1.2333377420858,1.55605517699883,0.942974704487816,0.163461903113459,0,0,0,0,0,0.597794722207204,0.117434498643765,0,0.842704840213491,0,0,0,0,0,0,1.43723628363248,0,0.250237039743928,0,0,0,0.150238058906597,0.340296549480063,0.89694817844431,0.427114777637135,0.635795703478686,2.10063767259082,1.64884046781502,2.06112432036503,2.23340227597908,3.37552664482532,1.55899208257918,1.51460264546469,0.736399189138395,0.161646056818812,4.61512470271599,0.906768884048762,2.20428770003634,0.193260853163297,0.545492241181669,0,0,0,0,0.207322110030741,0.252320850875628,0,1.56449532329816,1.92972281457866,0,0.928735856063958,0,0.473227200159376,0,0,0.330881918197182,0,0,0.404493924480493,0.392442930250692,1.15424147083917,0,0,2.8810180793198,1.47008711385542,0,0,0,0,0,1.20097467208968,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,0,2.31860809950154,0.939269553886573,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,1.32969058292435,1.04007436911366,0,0,0,4.71827379071887,3.7983512377401,1.64648067356154,0,3.19852753868291,0.791951872933429,0.904318131178758,1.74306691720059,2.19940580600526,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.613457458595699,1.00034104211935,0,0,0,0,0.234282829985426,0,0,0,0,0,3.38846096425523,0.195801157462741,0,0,0,0,0,0,0.907170879989041,0.248107807818777,1.84154367945675,0.280660094433074,0.512556597022804,1.02341449813341,2.73451665944133,1.48418066444991,0.616838775210622,0.887808626565635,0.98552587216571,1.03850885836724,0.929683027679674,0.120859449591622,0,0,3.90369123759663,2.1850940160806,4.72047893853927,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0,1.02090169995667,0.30347334256665,0.929691098594572,1.88887408098384,0.6970372701606,1.23213432070436,0.532306030317022,0.869932992075073,1.11194531462352,2.28999818787186,0,0,2.09693213316207,0.767693373934002,1.28381696410176,5.40945521474092,1.56989728039846,0.719489830333259,2.74537029736055,2.00281083987667,1.41527737101321,0,0,0.48763373908959,1.94970791705028,1.05650146756755,2.32049849393576,2.82810863907426,2.26016233240486,1.65409603063837,0.66343897524122,0.438450885253763,0.578775534266688,2.62357900818653,0.811641507850816,0.6196469961995,0.845086807596724,0.860468113224309,0.0982490410131212,0,3.19284957663538,0.422215270595328,0.329294892959902,0,0,0.48111056362756,0,0,0.753150406214233,0,1.68471475667626,0.443430153536676,0,0,0.764637207142375,0,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0.399158742865633,0.5745161103971,0.423347165447766,0,1.12318871245384,0,0,0,3.21654377823046,0,0,1.27753871307098,1.03051603426729,0,0,0,0.586164286206121,0.278406173895242,0,1.89318974933188,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0.593929361665277,0,0,0.140669416410513,0,0,0,2.98871982376605,1.10513566212459,0.251932747854276,0,0,1.24415835064723,0,0,2.55786185113436,1.7755813014648,0,3.33410970433911,0,0.371072392647405,0,0.260427761085233,0.61221999997337,0,0.341380344856499,0.508507300585533,0,0,1.45802306691627,0.173624994933292,0,0.361789315876224,3.05163472634166,5.08664595683633,3.25102380848902,0,0.10893846351899,1.53366118706464,5.00176680274681,0.113942055847001,0.23056390438806,0,0.217294743844016,0,1.28236630762607,0.533034776018635,0,0.784901281975124,0,0.451191321234361,0,0,0,0.317873157960757,0,0,0,0,0.995261931078505,2.29989667708682,1.22206028986725,0.296521128680622,0.494255755786011,0.208843899010911,0.539209063845416,0,0.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| ||
|short_description=p4@MEIS1 | |||
}} | }} |
Latest revision as of 01:14, 18 September 2015
Short description: | p4@MEIS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MEIS1_5end |
Coexpression cluster: | C1912_uterus_cervix_rectum_cerebellum_neuroepithelioma_sacrococcigeal_neuroectodermal |
Association with transcript: | 95bp_to_ENST00000491706_5end |
EntrezGene: | MEIS1 |
HGNC: | 7000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.41e-08 | 6 |
gland of oral region | 3.41e-08 | 6 |
gland of foregut | 3.41e-08 | 6 |
oral gland | 3.41e-08 | 6 |
oral cavity | 3.41e-08 | 6 |
segmental subdivision of nervous system | 6.12e-07 | 13 |
sympathetic nervous system | 7.10e-07 | 5 |
autonomic nervous system | 7.10e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.23e-07 | 10 |