FFCP PHASE1:Hg19::chr1:44115853..44115865,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:44115853..44115865,+ to FFCP PHASE1:Hg19::chr1:44115853..44115865,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9682 | |EntrezGene=9682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22978 | |HGNC=22978 | ||
|TSSclassifier=strong | |||
|UniProt=O75164 | |UniProt=O75164 | ||
|association_with_transcript=24bp_to_ENST00000372396_5end | |||
|cluster_id=chr1:44115853..44115865,+ | |||
|description=CAGE_peak_5_at_KDM4A_5end | |||
|id=chr1:44115853..44115865,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.59e-10!254;CL:0002321!8.25e-09!248;CL:0000220!1.64e-08!246;CL:0000012!1.24e-07!682;CL:0000548!2.48e-07!679;CL:0000004!2.48e-07!679;CL:0000255!2.48e-07!679;CL:0000076!8.99e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-11,253;CL:0002321,4.16e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@KDM4A | |||
}} | }} |
Latest revision as of 05:08, 18 September 2015
Short description: | p5@KDM4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KDM4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000372396_5end |
EntrezGene: | KDM4A |
HGNC: | 22978 |
UniProt: | O75164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-11 | 253 |
embryonic cell | 4.16e-07 | 250 |