FFCP PHASE1:Hg19::chr12:3862373..3862384,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:3862373..3862384,-
|short_description=p5@EFCAB4B
|description=CAGE_peak_5_at_EFCAB4B_5end
|association_with_transcript=-7bp_to_ENST00000444507,ENST0000053...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84766 | |EntrezGene=84766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28657 | |HGNC=28657 | ||
|TSSclassifier=strong | |||
|UniProt=D7UEQ6,Q9BSW2 | |UniProt=D7UEQ6,Q9BSW2 | ||
|association_with_transcript=-7bp_to_ENST00000444507,ENST00000535507,NM_001144958,NM_032680,uc001qmj.2,uc010sen.1,uc010seo.1_5end | |||
|cluster_id=chr12:3862373..3862384,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_5_at_EFCAB4B_5end | |||
|id=chr12:3862373..3862384,- | |||
|ontology_enrichment_celltype=CL:0000542!1.36e-14!53;CL:0000051!1.36e-14!53;CL:0000838!5.78e-14!52;CL:0000988!2.76e-13!182;CL:0000037!8.37e-13!172;CL:0000566!8.37e-13!172;CL:0002032!1.12e-12!165;CL:0000837!1.12e-12!165;CL:0000738!7.58e-11!140;CL:0002087!8.09e-11!119;CL:0000084!1.38e-10!25;CL:0000827!1.38e-10!25;CL:0002031!8.03e-09!124;CL:0000791!1.13e-08!18;CL:0000789!1.13e-08!18;CL:0002420!1.13e-08!18;CL:0002419!1.13e-08!18;CL:0000790!1.13e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.43e-10;2!CL:0000094;1.53e-09;8!CL:0000081;5.96e-07;11!CL:0000625;8.30e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.31e-10,2;CL:0000094,1.03e-09,8;CL:0000081,4.50e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;3.82e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.41e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.90e-11;2!UBERON:0003127;3.82e-10;2!UBERON:0001044;4.15e-08;6!UBERON:0003293;4.15e-08;6!UBERON:0003294;4.15e-08;6!UBERON:0010047;4.15e-08;6!UBERON:0003408;4.15e-08;6!UBERON:0000167;4.15e-08;6!UBERON:0004921;6.54e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.94e-11,2;UBERON:0003127,1.66e-10,2;UBERON:0003408,3.47e-08,10;UBERON:0001044,4.19e-08,6;UBERON:0003293,4.19e-08,6;UBERON:0003294,4.19e-08,6;UBERON:0010047,4.19e-08,6;UBERON:0000167,4.19e-08,6 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.410502947249729,0.787107813136792,0,1.53531759238885,0.154816123316076,0,0,0,0.0774672005803016,0.426507697462265,0,1.66198622559563,0.200544447470142,0.651032612147555,0,0,0.77272670290256,0.436194716338694,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0.689491361473237,0,0,0.376484679085209,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0,0,0.580418477257168,0,0,0,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0.633765858935825,0,0,0.561643155732475,0,0.64290234678832,0.855038231223746,0.39783335439818,0.182664153764634,1.75996244461323,1.09227722252426,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0.590129310341499,0.786021525498329,0.411202997999018,1.5046784585161,0.32592226663359,0.473447805734733,0,0.557052284425868,0.294605907474837,0.443067789167242,0.812411591295047,0.768547918354051,1.04047478047903,1.15106533222573,0.829050053357545,0.869409257205157,0.296573126324121,0.267540828089713,0,0.679856056185397,3.06576394881537,0.34362744548263,0.253019692019503,1.27426165729639,1.30216690771284,0.950452044448374,0.903450714466637,1.02389288923535,1.24930726552346,0.473554504088034,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0.417989933073621,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0.436094052142534,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.298897361103602,0,0.323745888736263,0,0.408308342509787,0,0.413303124703062,0,0,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0.30648779579902,0.600952235626387,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0.528290604079356,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.531876233169741,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.61642896765115,0.537182889719687,0.336255431980582,0.591092280605782,0.215627574859517,0.513372145118994,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0.500170521059677,0.271265023699736,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0.343143423810856,1.6541442089831,0.647142602455851,0.533637789017222,0,0,0,0.248107807818777,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0.246381468041427,0,0.232420756919918,0,0,0,0.459257792658427,0,0.131124414959424,0.902399225814824,0,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.275673144969061,0.107420244868274,0.145016693914229,0.340906509664404,0,0,0,0.893288987462089,0.10115778085555,0.464845549297286,0,0,0,1.59691809095107,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0.636406495851874,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0,2.02979043692868,0.764637207142375,1.70894156152249,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,1.11481905075431,0.28853842595289,0.0711418433484141,0.318852545457645,0.59873811429845,0.5745161103971,0.635020748171649,0,0,0.456469358066384,0.313359791546046,0,0,0.481764225311099,0.403599414382095,0.425846237690326,0,0,0.223676107892416,0,0.390776190804081,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0.568272293612826,0,0,0,0,0,0,0.988823245360557,0,0.398495976502139,0.828851746593443,0.251932747854276,0,0.492339221844278,0,0.718946809178615,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0.796554137998498,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0.325942115766024,0,0,0,1.02193298195737,0.156980256395025,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0.317873157960757,0,0,0.282706142867882,1.51472047819464,1.99052386215701,0.884575645033392,0.611030144933625,0,0.123563938946503,0.730953646538188,0,0,0,0.364909578431332,1.36965233252463,0.728341138602278,0.394584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| ||
|short_description=p5@EFCAB4B | |||
}} | }} |
Latest revision as of 06:00, 18 September 2015
Short description: | p5@EFCAB4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EFCAB4B_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -7bp_to_ENST00000444507, ENST00000535507, NM_001144958, NM_032680, uc001qmj.2, uc010sen.1, uc010seo.1_5end |
EntrezGene: | EFCAB4B |
HGNC: | 28657 |
UniProt: | D7UEQ6Q9BSW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.31e-10 | 2 |
granulocyte | 1.03e-09 | 8 |
blood cell | 4.50e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.94e-11 | 2 |
open tracheal system trachea | 1.66e-10 | 2 |
gland of gut | 3.47e-08 | 10 |
saliva-secreting gland | 4.19e-08 | 6 |
gland of oral region | 4.19e-08 | 6 |
gland of foregut | 4.19e-08 | 6 |
oral gland | 4.19e-08 | 6 |
oral cavity | 4.19e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.41e-10 | 2 |