FFCP PHASE1:Hg19::chr4:68829248..68829263,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339967 | |EntrezGene=339967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27954 | |HGNC=27954 | ||
|TSSclassifier=strong | |||
|UniProt=B5MDI9,A8KA85,Q6ZMR5 | |UniProt=B5MDI9,A8KA85,Q6ZMR5 | ||
|association_with_transcript=-16bp_to_ENST00000396188,NM_001114387,NM_182606,uc003hdr.1,uc003hds.1_5end | |association_with_transcript=-16bp_to_ENST00000396188,NM_001114387,NM_182606,uc003hdr.1,uc003hds.1_5end | ||
|cluster_id=chr4:68829248..68829263,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_TMPRSS11A_5end | |description=CAGE_peak_2_at_TMPRSS11A_5end | ||
|id=chr4:68829248..68829263,- | |id=chr4:68829248..68829263,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.99e-30;1!UBERON:0008814;1.15e-15;2!UBERON:0010056;1.15e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!1.33e-18!11;UBERON:0001723!5.05e-18!3;UBERON:0001033!5.05e-18!3;UBERON:0010056!5.05e-18!3;UBERON:0002372!5.15e-14!1;UBERON:0001961!5.15e-14!1;UBERON:0001744!5.15e-14!1;UBERON:0001735!5.15e-14!1;UBERON:0000996!8.58e-14!1;UBERON:0000989!1.10e-13!1;UBERON:0008811!1.10e-13!1;UBERON:0006258!1.10e-13!1;UBERON:0005876!1.10e-13!1;UBERON:0004874!1.10e-13!1;UBERON:0000161!1.59e-12!35;UBERON:0001042!4.47e-12!10;UBERON:0009145!4.47e-12!10;UBERON:0000002!3.02e-09!6;UBERON:0001560!3.02e-09!6;UBERON:0000162!1.84e-08!14;UBERON:0001353!1.84e-08!14;UBERON:0000163!1.84e-08!14;UBERON:0006866!1.84e-08!14;UBERON:0000164!1.84e-08!14;UBERON:0000931!1.84e-08!14;UBERON:0004122!6.22e-08!15;UBERON:0007023!8.24e-08!115;UBERON:0000341!1.05e-07!2;UBERON:0003127!1.45e-07!2;UBERON:0001255!2.12e-07!2;UBERON:0001556!2.12e-07!2;UBERON:0000078!6.15e-07!18;UBERON:0004921!9.66e-07!129;UBERON:0004185!9.66e-07!129 | |ontology_enrichment_uberon=UBERON:0006562!1.33e-18!11;UBERON:0001723!5.05e-18!3;UBERON:0001033!5.05e-18!3;UBERON:0010056!5.05e-18!3;UBERON:0002372!5.15e-14!1;UBERON:0001961!5.15e-14!1;UBERON:0001744!5.15e-14!1;UBERON:0001735!5.15e-14!1;UBERON:0000996!8.58e-14!1;UBERON:0000989!1.10e-13!1;UBERON:0008811!1.10e-13!1;UBERON:0006258!1.10e-13!1;UBERON:0005876!1.10e-13!1;UBERON:0004874!1.10e-13!1;UBERON:0000161!1.59e-12!35;UBERON:0001042!4.47e-12!10;UBERON:0009145!4.47e-12!10;UBERON:0000002!3.02e-09!6;UBERON:0001560!3.02e-09!6;UBERON:0000162!1.84e-08!14;UBERON:0001353!1.84e-08!14;UBERON:0000163!1.84e-08!14;UBERON:0006866!1.84e-08!14;UBERON:0000164!1.84e-08!14;UBERON:0000931!1.84e-08!14;UBERON:0004122!6.22e-08!15;UBERON:0007023!8.24e-08!115;UBERON:0000341!1.05e-07!2;UBERON:0003127!1.45e-07!2;UBERON:0001255!2.12e-07!2;UBERON:0001556!2.12e-07!2;UBERON:0000078!6.15e-07!18;UBERON:0004921!9.66e-07!129;UBERON:0004185!9.66e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.01e-38;3!UBERON:0001033;1.01e-38;3!UBERON:0002372;2.73e-29;1!UBERON:0001961;2.73e-29;1!UBERON:0001744;2.73e-29;1!UBERON:0001042;2.73e-29;1!UBERON:0001735;2.73e-29;1!UBERON:0005795;4.20e-29;1!UBERON:0000341;1.54e-15;2!UBERON:0006562;2.21e-15;2!UBERON:0001043;7.42e-11;3!UBERON:0000165;7.69e-10;28!UBERON:0002050;6.77e-07;5!UBERON:0005423;6.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.01e-38,3;UBERON:0001033,1.01e-38,3;UBERON:0010056,1.01e-38,3;UBERON:0002372,2.37e-29,1;UBERON:0001961,2.37e-29,1;UBERON:0001744,2.37e-29,1;UBERON:0001735,2.37e-29,1;UBERON:0001042,3.60e-26,10;UBERON:0009145,3.60e-26,10;UBERON:0006562,7.14e-24,11;UBERON:0000341,1.54e-15,2;UBERON:0001557,3.62e-14,19;UBERON:0000166,2.44e-12,22;UBERON:0001043,7.42e-11,3;UBERON:0009143,7.42e-11,3;UBERON:0000165,1.57e-09,29;UBERON:0000930,1.57e-09,29;UBERON:0000153,8.15e-08,62;UBERON:0007811,8.15e-08,62;UBERON:0000161,8.34e-08,36;UBERON:0008814,2.60e-07,18 | |||
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|short_description=p2@TMPRSS11A | |short_description=p2@TMPRSS11A | ||
}} | }} |
Latest revision as of 07:21, 18 September 2015
Short description: | p2@TMPRSS11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMPRSS11A_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -16bp_to_ENST00000396188, NM_001114387, NM_182606, uc003hdr.1, uc003hds.1_5end |
EntrezGene: | TMPRSS11A |
HGNC: | 27954 |
UniProt: | B5MDI9A8KA85Q6ZMR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.01e-38 | 3 |
gustatory system | 1.01e-38 | 3 |
future tongue | 1.01e-38 | 3 |
tonsil | 2.37e-29 | 1 |
mucosa-associated lymphoid tissue | 2.37e-29 | 1 |
lymphoid tissue | 2.37e-29 | 1 |
tonsillar ring | 2.37e-29 | 1 |
chordate pharynx | 3.60e-26 | 10 |
pharyngeal region of foregut | 3.60e-26 | 10 |
pharynx | 7.14e-24 | 11 |
throat | 1.54e-15 | 2 |
upper respiratory tract | 3.62e-14 | 19 |
oral opening | 2.44e-12 | 22 |
esophagus | 7.42e-11 | 3 |
esophageal region | 7.42e-11 | 3 |
mouth | 1.57e-09 | 29 |
stomodeum | 1.57e-09 | 29 |
anterior region of body | 8.15e-08 | 62 |
craniocervical region | 8.15e-08 | 62 |
orifice | 8.34e-08 | 36 |
pharyngeal arch system | 2.60e-07 | 18 |