FFCP PHASE1:Hg19::chr2:71680760..71680764,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8291 | |EntrezGene=8291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3097 | |HGNC=3097 | ||
|TSSclassifier=strong | |||
|UniProt=O75923 | |UniProt=O75923 | ||
|association_with_transcript=7bp_to_NM_001130976,NM_001130977,NM_001130978,NM_001130979,NM_001130980,NM_001130981,NM_003494,uc002sie.2,uc002sig.3,uc010fee.2,uc010fef.2,uc010feg.2,uc010feh.2,uc010fei.2,uc010yqx.1_5end | |association_with_transcript=7bp_to_NM_001130976,NM_001130977,NM_001130978,NM_001130979,NM_001130980,NM_001130981,NM_003494,uc002sie.2,uc002sig.3,uc010fee.2,uc010fef.2,uc010feg.2,uc010feh.2,uc010fei.2,uc010yqx.1_5end | ||
|cluster_id=chr2:71680760..71680764,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_15_at_DYSF_5end | |description=CAGE_peak_15_at_DYSF_5end | ||
|id=chr2:71680760..71680764,+ | |id=chr2:71680760..71680764,+ | ||
|ontology_enrichment_celltype=CL:0002139!8.22e-14!24;CL:0000115!1.76e-13!35;CL:0000213!2.18e-10!57;CL:0000215!2.18e-10!57;CL:0002078!3.74e-10!44;CL:0000071!5.85e-10!18;CL:0002546!5.85e-10!18;CL:0000766!5.35e-09!76;CL:0002057!5.51e-09!42;CL:0000860!1.27e-08!45;CL:1000413!3.63e-08!9;CL:0000094!4.67e-08!8 | |ontology_enrichment_celltype=CL:0002139!8.22e-14!24;CL:0000115!1.76e-13!35;CL:0000213!2.18e-10!57;CL:0000215!2.18e-10!57;CL:0002078!3.74e-10!44;CL:0000071!5.85e-10!18;CL:0002546!5.85e-10!18;CL:0000766!5.35e-09!76;CL:0002057!5.51e-09!42;CL:0000860!1.27e-08!45;CL:1000413!3.63e-08!9;CL:0000094!4.67e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.13e-23;8!CL:0000775;2.98e-23;3!CL:0000081;5.60e-17;11!CL:0000771;4.77e-16;2!CL:0002536;3.70e-15;2!CL:0002139;2.66e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.00e-23,8;CL:0000775,2.89e-23,3;CL:0000081,5.36e-17,11;CL:0000771,4.45e-16,2;CL:0002536,9.41e-15,2;CL:0000766,2.53e-08,72;CL:0002139,3.19e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.97e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.85e-10!18;UBERON:0004638!5.85e-10!18;UBERON:0004852!5.85e-10!18;UBERON:0003081!8.05e-10!216;UBERON:0001009!4.55e-09!113;UBERON:0003915!3.63e-08!9;UBERON:0004700!3.63e-08!9;UBERON:0001917!3.63e-08!9;UBERON:0002193!3.70e-08!112;UBERON:0004535!7.32e-08!110;UBERON:0000487!2.19e-07!22;UBERON:0007023!3.94e-07!115;UBERON:0000467!4.91e-07!625;UBERON:0000480!5.84e-07!626 | |ontology_enrichment_uberon=UBERON:0001986!5.85e-10!18;UBERON:0004638!5.85e-10!18;UBERON:0004852!5.85e-10!18;UBERON:0003081!8.05e-10!216;UBERON:0001009!4.55e-09!113;UBERON:0003915!3.63e-08!9;UBERON:0004700!3.63e-08!9;UBERON:0001917!3.63e-08!9;UBERON:0002193!3.70e-08!112;UBERON:0004535!7.32e-08!110;UBERON:0000487!2.19e-07!22;UBERON:0007023!3.94e-07!115;UBERON:0000467!4.91e-07!625;UBERON:0000480!5.84e-07!626 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,1.05506791291381,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0.651032612147555,0.223915474239924,0.647787332037959,0.257575567634187,0.726991193897824,0.377875943688809,0.242584061187816,0.232429036905685,0,0,1.43846196161075,1.0246428261164,0.236482229888585,1.37898272294647,0,0,0.752969358170419,0,0,0.918251677112708,0,0,0.659702600373432,0,0.426224750532694,0.580418477257168,0,1.86846674698672,0.75374599577023,0.521482918420201,0.65156653411535,0,0,0,0,0.212604299965044,0,0.673971786878971,0.150176892841506,1.12507910687956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,1.29208379584664,0.71153252537342,0,0.402829317109147,0.760272105718513,3.1728067481262,1.10298924103761,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,3.9534125230819,3.87780264148325,0.436094052142534,0,0,0.264818361626438,0,0,0,1.06748995729705,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,1.14152491340759,0,0,0,0,0,0.93733833986777,0.335964256397719,0.567100388969546,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,2.99602809578873,5.9832291840805,9.11714129559278,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.431831832204279,0,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0,0,0.824328093181778,0,0,1.72279661398852,0,0,0.290012154876366,0,0,0,0,0,0,0.623224249527161,0.495854746082934,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,1.12972560932135,0,1.68471475667626,0,0.459446800413919,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0.46112780877612,0,0.434589487688032,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.157611414598396,0.104909176269996,0.316801009558219,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,1.1531308121143,0,0.171488009437418,0.203909198930495,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0,0.490296643507811,0,0,0,0,0,0.563903507879121,0.45120521581504,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.407955318967927,0.534434810531121,0.18378979906969,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0.430333232356058,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,1.05506791291381,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0.651032612147555,0.223915474239924,0.647787332037959,0.257575567634187,0.726991193897824,0.377875943688809,0.242584061187816,0.232429036905685,0,0,1.43846196161075,1.0246428261164,0.236482229888585,1.37898272294647,0,0,0.752969358170419,0,0,0.918251677112708,0,0,0.659702600373432,0,0.426224750532694,0.580418477257168,0,1.86846674698672,0.75374599577023,0.521482918420201,0.65156653411535,0,0,0,0,0.212604299965044,0,0.673971786878971,0.150176892841506,1.12507910687956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,1.29208379584664,0.71153252537342,0,0.402829317109147,0.760272105718513,3.1728067481262,1.10298924103761,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,3.9534125230819,3.87780264148325,0.436094052142534,0,0,0.264818361626438,0,0,0,1.06748995729705,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,1.14152491340759,0,0,0,0,0,0.93733833986777,0.335964256397719,0.567100388969546,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,2.99602809578873,5.9832291840805,9.11714129559278,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.431831832204279,0,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0,0,0.824328093181778,0,0,1.72279661398852,0,0,0.290012154876366,0,0,0,0,0,0,0.623224249527161,0.495854746082934,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,1.12972560932135,0,1.68471475667626,0,0.459446800413919,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0.46112780877612,0,0.434589487688032,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.157611414598396,0.104909176269996,0.316801009558219,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,1.1531308121143,0,0.171488009437418,0.203909198930495,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0,0.490296643507811,0,0,0,0,0,0.563903507879121,0.45120521581504,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.407955318967927,0.534434810531121,0.18378979906969,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0.430333232356058,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p15@DYSF | |short_description=p15@DYSF | ||
}} | }} |
Latest revision as of 07:57, 18 September 2015
Short description: | p15@DYSF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_DYSF_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 7bp_to_NM_001130976, NM_001130977, NM_001130978, NM_001130979, NM_001130980, NM_001130981, NM_003494, uc002sie.2, uc002sig.3, uc010fee.2, uc010fef.2, uc010feg.2, uc010feh.2, uc010fei.2, uc010yqx.1_5end |
EntrezGene: | DYSF |
HGNC: | 3097 |
UniProt: | O75923 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.00e-23 | 8 |
neutrophil | 2.89e-23 | 3 |
blood cell | 5.36e-17 | 11 |
eosinophil | 4.45e-16 | 2 |
amniotic epithelial cell | 9.41e-15 | 2 |
myeloid leukocyte | 2.53e-08 | 72 |
endothelial cell of vascular tree | 3.19e-07 | 24 |