FFCP PHASE1:Hg19::chr15:59225867..59225890,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:59225867..59225890,-
|short_description=p2@SLTM
|description=CAGE_peak_2_at_SLTM_5end
|association_with_transcript=-15bp_to_ENST00000380516,NM_001013843,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79811 | |EntrezGene=79811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20709 | |HGNC=20709 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWH9 | |UniProt=Q9NWH9 | ||
|association_with_transcript=-15bp_to_ENST00000380516,NM_001013843,NM_024755,uc002afo.2,uc002afp.2,uc002afq.2,uc002afr.1,uc010bgd.2_5end | |||
|cluster_id=chr15:59225867..59225890,- | |||
|description=CAGE_peak_2_at_SLTM_5end | |||
|id=chr15:59225867..59225890,- | |||
|ontology_enrichment_celltype=CL:0000738!2.26e-13!140;CL:0000037!8.31e-13!172;CL:0000566!8.31e-13!172;CL:0002032!1.06e-11!165;CL:0000837!1.06e-11!165;CL:0000542!1.01e-10!53;CL:0000051!1.01e-10!53;CL:0000838!1.30e-10!52;CL:0002031!1.54e-10!124;CL:0000988!2.35e-10!182;CL:0002087!9.05e-10!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.57e-14,136;CL:0000037,3.90e-13,168;CL:0002032,5.12e-12,161;CL:0000837,5.12e-12,161;CL:0000988,5.20e-11,177;CL:0002031,6.46e-11,120;CL:0000542,1.01e-10,53;CL:0000051,1.01e-10,53;CL:0000838,1.30e-10,52;CL:0002087,3.90e-10,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SLTM | |||
}} | }} |
Latest revision as of 08:22, 18 September 2015
Short description: | p2@SLTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLTM_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000380516, NM_001013843, NM_024755, uc002afo.2, uc002afp.2, uc002afq.2, uc002afr.1, uc010bgd.2_5end |
EntrezGene: | SLTM |
HGNC: | 20709 |
UniProt: | Q9NWH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.57e-14 | 136 |
hematopoietic stem cell | 3.90e-13 | 168 |
hematopoietic oligopotent progenitor cell | 5.12e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.12e-12 | 161 |
hematopoietic cell | 5.20e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 6.46e-11 | 120 |
lymphocyte | 1.01e-10 | 53 |
common lymphoid progenitor | 1.01e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.30e-10 | 52 |
nongranular leukocyte | 3.90e-10 | 115 |