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FFCP PHASE1:Hg19::chr2:176971685..176971700,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:176971685..176971700,+
|DHSsupport=supported 
|short_description=p6@HOXD11
|DPIdataset=robust
|description=CAGE_peak_6_at_HOXD11_5end
|association_with_transcript=-313bp_to_ENST00000249504_5end
|EntrezGene=3237
|EntrezGene=3237
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=5134
|HGNC=5134
|TSSclassifier=strong
|UniProt=P31277
|UniProt=P31277
|association_with_transcript=-313bp_to_ENST00000249504_5end
|cluster_id=chr2:176971685..176971700,+
|coexpression_cluster_id=C1885
|description=CAGE_peak_6_at_HOXD11_5end
|id=chr2:176971685..176971700,+
|ontology_enrichment_celltype=CL:1000497!2.17e-13!18;CL:0002518!2.17e-13!18;CL:1000449!7.17e-13!16;CL:1000507!1.67e-11!12;CL:1000494!1.67e-11!12;CL:0002681!5.76e-08!13;CL:0002584!5.76e-08!13
|ontology_enrichment_celltype_v019=CL:1000449;3.69e-31;15!CL:1000507;1.45e-30;10!CL:1000494;1.45e-30;10!CL:1000497;2.83e-27;17!CL:0002518;2.83e-27;17!CL:0002681;2.20e-19;12!CL:0002584;2.20e-19;12!CL:1000746;9.11e-12;7!CL:1000612;9.11e-12;7!CL:0000650;2.28e-11;2!CL:1000500;2.28e-11;2!CL:1000618;2.28e-11;2!CL:1001318;2.28e-11;2!CL:0002173;2.28e-11;2!CL:0000333;2.08e-09;5
|ontology_enrichment_celltype_v019_2=CL:1000449,2.50e-31,15;CL:1000507,7.13e-31,10;CL:1000494,7.13e-31,10;CL:1000497,2.01e-27,17;CL:0002518,2.01e-27,17;CL:0002681,1.97e-19,12;CL:0002584,1.97e-19,12;CL:1000746,1.03e-11,7;CL:1000612,1.03e-11,7;CL:0000650,2.11e-11,2;CL:1000500,2.11e-11,2;CL:1000618,2.11e-11,2;CL:1001318,2.11e-11,2;CL:0002173,2.11e-11,2
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:171!1.87e-10!10;DOID:14566!8.66e-08!239;DOID:0050687!1.04e-07!143;DOID:162!4.06e-07!235
|ontology_enrichment_disease_v019=DOID:171;1.37e-17;10!DOID:169;6.51e-08;6!DOID:3095;1.16e-07;22!DOID:2994;1.16e-07;22
|ontology_enrichment_disease_v019_2=DOID:171,1.22e-17,10;DOID:169,6.28e-08,6;DOID:3095,1.10e-07,22;DOID:2994,1.10e-07,22
|ontology_enrichment_uberon=UBERON:0006554!4.04e-20!44;UBERON:0001008!1.60e-19!45;UBERON:0000489!4.29e-18!32;UBERON:0002113!1.32e-15!27;UBERON:0003918!1.32e-15!27;UBERON:0005095!1.32e-15!27;UBERON:0007687!1.32e-15!27;UBERON:0004211!7.17e-13!16;UBERON:0001285!7.17e-13!16;UBERON:0007684!7.17e-13!16;UBERON:0003220!7.17e-13!16;UBERON:0004208!7.17e-13!16;UBERON:0006555!5.75e-12!17;UBERON:0005103!5.75e-12!17;UBERON:0000083!5.75e-12!17;UBERON:0009201!5.75e-12!17;UBERON:0004819!5.75e-12!17;UBERON:0006553!5.75e-12!17;UBERON:0003074!5.75e-12!17;UBERON:0003060!5.75e-12!17;UBERON:0004876!7.27e-12!20;UBERON:0009773!1.67e-11!12;UBERON:0001231!1.67e-11!12;UBERON:0004810!1.67e-11!12;UBERON:0003064!2.38e-11!37;UBERON:0000080!3.65e-11!18;UBERON:0002120!3.65e-11!18;UBERON:0004875!3.65e-11!18;UBERON:0005721!3.65e-11!18;UBERON:0005754!3.65e-11!18;UBERON:0007297!3.65e-11!18;UBERON:0003887!3.19e-09!21;UBERON:0005910!2.63e-08!6;UBERON:0001225!5.76e-08!13;UBERON:0008987!5.76e-08!13;UBERON:0000059!8.84e-08!11;UBERON:0003103!1.76e-07!69;UBERON:0001155!4.07e-07!9;UBERON:0000058!5.30e-07!26
|ontology_enrichment_uberon_v019=UBERON:0002113;4.20e-32;24!UBERON:0011143;4.20e-32;24!UBERON:0006555;3.69e-31;15!UBERON:0004819;3.69e-31;15!UBERON:0001285;3.69e-31;15!UBERON:0007684;3.69e-31;15!UBERON:0004211;1.45e-30;10!UBERON:0009773;1.45e-30;10!UBERON:0001231;1.45e-30;10!UBERON:0004810;1.45e-30;10!UBERON:0000489;4.34e-26;29!UBERON:0006554;3.98e-25;30!UBERON:0001008;3.98e-25;30!UBERON:0001225;2.20e-19;12!UBERON:0008987;2.20e-19;12!UBERON:0002050;1.70e-16;5!UBERON:0005423;1.70e-16;5!UBERON:0001851;2.52e-15;15!UBERON:0000353;2.52e-15;15!UBERON:0002346;3.31e-12;4!UBERON:0000923;3.31e-12;4!UBERON:0010316;3.31e-12;4!UBERON:0005291;3.31e-12;4!UBERON:0000074;9.11e-12;7!UBERON:0001229;9.11e-12;7!UBERON:0003567;2.28e-11;2!UBERON:0003838;2.28e-11;2!UBERON:0003586;2.28e-11;2!UBERON:0005169;2.28e-11;2!UBERON:0002321;2.28e-11;2!UBERON:0005215;2.28e-11;2!UBERON:0002303;2.28e-11;2!UBERON:0002319;2.28e-11;2!UBERON:0005172;8.38e-10;52!UBERON:0005173;8.38e-10;52!UBERON:0000013;2.08e-09;5!UBERON:0002410;2.08e-09;5!UBERON:0002417;6.74e-08;58!UBERON:0000916;6.74e-08;58!UBERON:0003103;8.00e-07;61
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|short_description=p6@HOXD11
}}
}}

Latest revision as of 08:45, 18 September 2015

Short description:p6@HOXD11
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_HOXD11_5end
Coexpression cluster:C1885_neuroectodermal_nonsmall_small_neuroblastoma_embryonic_merkel_hairy
Association with transcript: -313bp_to_ENST00000249504_5end
EntrezGene:HOXD11
HGNC: 5134
UniProt: P31277
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data