FFCP PHASE1:Hg19::chr4:70893956..70893962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3347 | |EntrezGene=3347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5284 | |HGNC=5284 | ||
|TSSclassifier=strong | |||
|UniProt=P15516 | |UniProt=P15516 | ||
|association_with_transcript=-167bp_to_ENST00000526767,NM_000200,uc003hew.2_5end | |association_with_transcript=-167bp_to_ENST00000526767,NM_000200,uc003hew.2_5end | ||
|cluster_id=chr4:70893956..70893962,+ | |||
|coexpression_cluster_id=C70 | |coexpression_cluster_id=C70 | ||
|description=CAGE_peak_3_at_HTN3_5end | |description=CAGE_peak_3_at_HTN3_5end | ||
|id=chr4:70893956..70893962,+ | |id=chr4:70893956..70893962,+ | ||
|ontology_enrichment_celltype=CL:0002621!1.21e-08!3;CL:0002166!1.30e-08!3 | |ontology_enrichment_celltype=CL:0002621!1.21e-08!3;CL:0002166!1.30e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.62e-41;1!UBERON:0006298;1.48e-40;1 | |||
|ontology_enrichment_disease=DOID:1909!3.24e-12!2;DOID:1036!6.16e-12!8;DOID:8692!5.08e-07!31 | |ontology_enrichment_disease=DOID:1909!3.24e-12!2;DOID:1036!6.16e-12!8;DOID:8692!5.08e-07!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!2.55e-45!2;UBERON:0001044!5.37e-34!6;UBERON:0003293!5.37e-34!6;UBERON:0003294!5.37e-34!6;UBERON:0010047!5.37e-34!6;UBERON:0000167!5.37e-34!6;UBERON:0001831!1.07e-23!1;UBERON:0001567!1.07e-23!1;UBERON:0008801!1.07e-23!1;UBERON:0001736!1.67e-23!1;UBERON:0006298!1.67e-23!1;UBERON:0003408!9.82e-21!10;UBERON:0000166!2.48e-17!21;UBERON:0000165!4.11e-13!28;UBERON:0000930!4.11e-13!28;UBERON:0004089!1.48e-12!2;UBERON:0000078!7.69e-12!18;UBERON:0000161!1.43e-10!35;UBERON:0001949!1.21e-08!3;UBERON:0001444!8.42e-08!48;UBERON:0002365!3.95e-07!31;UBERON:0002330!3.95e-07!31;UBERON:0001708!9.11e-07!4;UBERON:0001704!9.11e-07!4 | |ontology_enrichment_uberon=UBERON:0001829!2.55e-45!2;UBERON:0001044!5.37e-34!6;UBERON:0003293!5.37e-34!6;UBERON:0003294!5.37e-34!6;UBERON:0010047!5.37e-34!6;UBERON:0000167!5.37e-34!6;UBERON:0001831!1.07e-23!1;UBERON:0001567!1.07e-23!1;UBERON:0008801!1.07e-23!1;UBERON:0001736!1.67e-23!1;UBERON:0006298!1.67e-23!1;UBERON:0003408!9.82e-21!10;UBERON:0000166!2.48e-17!21;UBERON:0000165!4.11e-13!28;UBERON:0000930!4.11e-13!28;UBERON:0004089!1.48e-12!2;UBERON:0000078!7.69e-12!18;UBERON:0000161!1.43e-10!35;UBERON:0001949!1.21e-08!3;UBERON:0001444!8.42e-08!48;UBERON:0002365!3.95e-07!31;UBERON:0002330!3.95e-07!31;UBERON:0001708!9.11e-07!4;UBERON:0001704!9.11e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.56e-79;2!UBERON:0001044;8.15e-60;6!UBERON:0003293;8.15e-60;6!UBERON:0003294;8.15e-60;6!UBERON:0010047;8.15e-60;6!UBERON:0003408;8.15e-60;6!UBERON:0000167;8.15e-60;6!UBERON:0001831;6.62e-41;1!UBERON:0001567;6.62e-41;1!UBERON:0001736;1.48e-40;1!UBERON:0001041;2.90e-26;14!UBERON:0004089;3.11e-21;2!UBERON:0000161;1.31e-19;19!UBERON:0000166;1.31e-19;19!UBERON:0000165;1.34e-13;28!UBERON:0002365;4.18e-12;31!UBERON:0002330;4.18e-12;31!UBERON:0004921;3.58e-10;33!UBERON:0007811;6.32e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.56e-79,2;UBERON:0001044,8.15e-60,6;UBERON:0003293,8.15e-60,6;UBERON:0003294,8.15e-60,6;UBERON:0010047,8.15e-60,6;UBERON:0000167,8.15e-60,6;UBERON:0001831,6.62e-41,1;UBERON:0001567,6.62e-41,1;UBERON:0008801,6.62e-41,1;UBERON:0001736,1.48e-40,1;UBERON:0006298,1.48e-40,1;UBERON:0003408,2.40e-36,10;UBERON:0004089,3.11e-21,2;UBERON:0000166,4.60e-17,22;UBERON:0000165,3.69e-13,29;UBERON:0000930,3.69e-13,29;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0000161,9.21e-11,36;UBERON:0001444,4.12e-08,49;UBERON:0000033,3.45e-07,56;UBERON:0002530,7.38e-07,59 | |||
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|short_description=p3@HTN3 | |short_description=p3@HTN3 | ||
}} | }} |
Latest revision as of 09:16, 18 September 2015
Short description: | p3@HTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HTN3_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -167bp_to_ENST00000526767, NM_000200, uc003hew.2_5end |
EntrezGene: | HTN3 |
HGNC: | 5284 |
UniProt: | P15516 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.56e-79 | 2 |
saliva-secreting gland | 8.15e-60 | 6 |
gland of oral region | 8.15e-60 | 6 |
gland of foregut | 8.15e-60 | 6 |
oral gland | 8.15e-60 | 6 |
oral cavity | 8.15e-60 | 6 |
parotid gland | 6.62e-41 | 1 |
cheek | 6.62e-41 | 1 |
parotid gland primordium | 6.62e-41 | 1 |
submandibular gland | 1.48e-40 | 1 |
submandibular gland primordium | 1.48e-40 | 1 |
gland of gut | 2.40e-36 | 10 |
midface | 3.11e-21 | 2 |
oral opening | 4.60e-17 | 22 |
mouth | 3.69e-13 | 29 |
stomodeum | 3.69e-13 | 29 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
orifice | 9.21e-11 | 36 |
subdivision of head | 4.12e-08 | 49 |
head | 3.45e-07 | 56 |
gland | 7.38e-07 | 59 |