FFCP PHASE1:Hg19::chr17:7991002..7991009,-: Difference between revisions
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|id=chr17:7991002..7991009,-
|short_description=p8@ALOX12B
|description=CAGE_peak_8_at_ALOX12B_5end
|association_with_transcript=11bp_to_NM_001139,uc002gjy.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=242 | |EntrezGene=242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=430 | |HGNC=430 | ||
|TSSclassifier=strong | |||
|UniProt=O75342 | |UniProt=O75342 | ||
|association_with_transcript=11bp_to_NM_001139,uc002gjy.1_5end | |||
|cluster_id=chr17:7991002..7991009,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_8_at_ALOX12B_5end | |||
|id=chr17:7991002..7991009,- | |||
|ontology_enrichment_celltype=CL:0002150!2.38e-15!3;CL:0000861!2.38e-15!3;CL:0001014!5.73e-07!2;CL:0001016!5.73e-07!2;CL:0000317!6.42e-07!2;CL:1000448!6.42e-07!2;CL:0002308!6.42e-07!2;CL:0002140!6.42e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.61e-34;2!UBERON:0010056;3.61e-34;2!UBERON:0005795;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.71e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.60e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0005418!1.25e-12!1;UBERON:0001389!1.25e-12!1;UBERON:0000026!1.25e-12!1;UBERON:0008784!1.25e-12!1;UBERON:0006058!1.25e-12!1;UBERON:0003663!1.25e-12!1;UBERON:0001383!1.25e-12!1;UBERON:0004256!1.25e-12!1;UBERON:0002529!1.25e-12!1;UBERON:0004708!1.25e-12!1;UBERON:0002101!1.25e-12!1;UBERON:0004709!1.25e-12!1;UBERON:0003661!1.25e-12!1;UBERON:0002471!1.25e-12!1;UBERON:0004357!1.25e-12!1;UBERON:0009872!1.25e-12!1;UBERON:0004347!1.25e-12!1;UBERON:0005420!1.25e-12!1;UBERON:0005732!1.25e-12!1;UBERON:0006057!1.25e-12!1;UBERON:0000978!1.25e-12!1;UBERON:0002103!1.25e-12!1;UBERON:0001665!1.25e-12!1;UBERON:0003823!1.25e-12!1;UBERON:0000154!1.25e-12!1;UBERON:0005733!1.25e-12!1;UBERON:0005730!1.25e-12!1;UBERON:0007029!1.57e-12!1;UBERON:0002372!1.75e-12!1;UBERON:0001961!1.75e-12!1;UBERON:0001744!1.75e-12!1;UBERON:0001735!1.75e-12!1;UBERON:0000002!1.87e-08!6;UBERON:0001560!1.87e-08!6;UBERON:0001003!1.14e-07!14;UBERON:0007376!1.14e-07!14;UBERON:0007383!1.14e-07!14;UBERON:0001630!6.07e-07!2;UBERON:0005090!6.07e-07!2;UBERON:0002419!6.42e-07!2;UBERON:0007771!6.42e-07!2;UBERON:0003297!6.42e-07!2;UBERON:0001821!6.42e-07!2;UBERON:0003487!6.42e-07!2;UBERON:0001820!6.42e-07!2;UBERON:0005089!6.42e-07!2;UBERON:0005088!6.42e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;3.34e-66;1!UBERON:0001723;2.62e-23;3!UBERON:0001033;2.62e-23;3!UBERON:0002050;1.71e-14;5!UBERON:0005423;1.71e-14;5!UBERON:0000002;2.59e-12;6!UBERON:0001560;2.59e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.62e-23,3;UBERON:0001033,2.62e-23,3;UBERON:0010056,2.62e-23,3;UBERON:0005795,4.26e-13,22;UBERON:0000002,2.45e-12,6;UBERON:0001560,2.45e-12,6;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11 | |||
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|short_description=p8@ALOX12B | |||
}} | }} |
Latest revision as of 09:46, 18 September 2015
Short description: | p8@ALOX12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ALOX12B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 11bp_to_NM_001139, uc002gjy.1_5end |
EntrezGene: | ALOX12B |
HGNC: | 430 |
UniProt: | O75342 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.62e-23 | 3 |
gustatory system | 2.62e-23 | 3 |
future tongue | 2.62e-23 | 3 |
embryonic uterus | 4.26e-13 | 22 |
uterine cervix | 2.45e-12 | 6 |
neck of organ | 2.45e-12 | 6 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.60e-14 | 5 |