FFCP PHASE1:Hg19::chr17:7991064..7991073,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=242 | |EntrezGene=242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=430 | |HGNC=430 | ||
|TSSclassifier=strong | |||
|UniProt=O75342 | |UniProt=O75342 | ||
|association_with_transcript=-42bp_to_ENST00000319144_5end | |association_with_transcript=-42bp_to_ENST00000319144_5end | ||
|cluster_id=chr17:7991064..7991073,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_4_at_ALOX12B_5end | |description=CAGE_peak_4_at_ALOX12B_5end | ||
|id=chr17:7991064..7991073,- | |id=chr17:7991064..7991073,- | ||
|ontology_enrichment_celltype=CL:0000312!4.23e-15!5;CL:0000240!1.12e-12!6;CL:0000311!1.12e-12!6;CL:0000079!1.12e-12!6;CL:0000237!1.12e-12!6;CL:0000036!1.12e-12!6;CL:0000357!1.12e-12!6;CL:0000114!1.12e-12!6;CL:0002159!4.03e-10!13;CL:0000362!1.23e-09!8 | |ontology_enrichment_celltype=CL:0000312!4.23e-15!5;CL:0000240!1.12e-12!6;CL:0000311!1.12e-12!6;CL:0000079!1.12e-12!6;CL:0000237!1.12e-12!6;CL:0000036!1.12e-12!6;CL:0000357!1.12e-12!6;CL:0000114!1.12e-12!6;CL:0002159!4.03e-10!13;CL:0000362!1.23e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0002623;7.42e-11;3!CL:0000622;5.08e-07;5!CL:0000312;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,7.42e-11,3;CL:0000622,5.08e-07,5;CL:0000312,6.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.15e-15;2!UBERON:0010056;1.15e-15;2 | |||
|ontology_enrichment_disease=DOID:3151!2.55e-09!1;DOID:3149!2.55e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001042!3.80e-13!10;UBERON:0009145!3.80e-13!10;UBERON:0006562!5.73e-12!11;UBERON:0001723!6.04e-12!3;UBERON:0001033!6.04e-12!3;UBERON:0010056!6.04e-12!3;UBERON:0007029!9.44e-10!1;UBERON:0002372!1.32e-09!1;UBERON:0001961!1.32e-09!1;UBERON:0001744!1.32e-09!1;UBERON:0001735!1.32e-09!1;UBERON:0001003!1.66e-09!14;UBERON:0007376!1.66e-09!14;UBERON:0007383!1.66e-09!14;UBERON:0006834!3.53e-09!1;UBERON:0000014!3.99e-09!4;UBERON:0000997!4.50e-09!1;UBERON:0005056!4.50e-09!1;UBERON:0000078!1.54e-07!18;UBERON:0001557!5.51e-07!19;UBERON:0003102!5.74e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.33e-29;1!UBERON:0005795;2.37e-29;1!UBERON:0002372;4.20e-29;1!UBERON:0001961;4.20e-29;1!UBERON:0001744;4.20e-29;1!UBERON:0001042;4.20e-29;1!UBERON:0001735;4.20e-29;1!UBERON:0006562;2.74e-15;2!UBERON:0001723;6.73e-11;3!UBERON:0001033;6.73e-11;3!UBERON:0000165;7.57e-10;28!UBERON:0001003;1.53e-08;15!UBERON:0007376;1.53e-08;15!UBERON:0000014;1.96e-08;4!UBERON:0002050;6.04e-07;5!UBERON:0005423;6.04e-07;5!UBERON:0000161;6.38e-07;19!UBERON:0000166;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.33e-29,1;UBERON:0002372,4.20e-29,1;UBERON:0001961,4.20e-29,1;UBERON:0001744,4.20e-29,1;UBERON:0001735,4.20e-29,1;UBERON:0000166,2.44e-12,22;UBERON:0001042,2.51e-12,10;UBERON:0009145,2.51e-12,10;UBERON:0006562,2.68e-11,11;UBERON:0001723,6.73e-11,3;UBERON:0001033,6.73e-11,3;UBERON:0010056,6.73e-11,3;UBERON:0000165,1.57e-09,29;UBERON:0000930,1.57e-09,29;UBERON:0001003,1.53e-08,15;UBERON:0007376,1.53e-08,15;UBERON:0007383,1.53e-08,15;UBERON:0000014,1.96e-08,4;UBERON:0000161,8.34e-08,36;UBERON:0003102,1.77e-07,99;UBERON:0001557,6.19e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,2.24803506515239,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50962739701486,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14755797088455,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,8.27323642008453,0.342233301085281,1.14498490124799,0,0,0,0,0,0,0,0.122241444182866,2.03448089157869,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,2.24803506515239,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50962739701486,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14755797088455,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,8.27323642008453,0.342233301085281,1.14498490124799,0,0,0,0,0,0,0,0.122241444182866,2.03448089157869,0,0,0 | ||
|short_description=p4@ALOX12B | |short_description=p4@ALOX12B | ||
}} | }} |
Latest revision as of 09:47, 18 September 2015
Short description: | p4@ALOX12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALOX12B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -42bp_to_ENST00000319144_5end |
EntrezGene: | ALOX12B |
HGNC: | 430 |
UniProt: | O75342 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 7.42e-11 | 3 |
acinar cell | 5.08e-07 | 5 |
keratinocyte | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
surface | 1.33e-29 | 1 |
tonsil | 4.20e-29 | 1 |
mucosa-associated lymphoid tissue | 4.20e-29 | 1 |
lymphoid tissue | 4.20e-29 | 1 |
tonsillar ring | 4.20e-29 | 1 |
oral opening | 2.44e-12 | 22 |
chordate pharynx | 2.51e-12 | 10 |
pharyngeal region of foregut | 2.51e-12 | 10 |
pharynx | 2.68e-11 | 11 |
tongue | 6.73e-11 | 3 |
gustatory system | 6.73e-11 | 3 |
future tongue | 6.73e-11 | 3 |
mouth | 1.57e-09 | 29 |
stomodeum | 1.57e-09 | 29 |
skin epidermis | 1.53e-08 | 15 |
outer epithelium | 1.53e-08 | 15 |
enveloping layer of ectoderm | 1.53e-08 | 15 |
zone of skin | 1.96e-08 | 4 |
orifice | 8.34e-08 | 36 |
surface structure | 1.77e-07 | 99 |
upper respiratory tract | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.70e-07 | 5 |