FFCP PHASE1:Hg19::chr6:35216360..35216374,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222663 | |EntrezGene=222663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13655 | |HGNC=13655 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z3I8 | |UniProt=Q7Z3I8 | ||
|association_with_transcript=0bp_to_BX537875_5end | |||
|cluster_id=chr6:35216360..35216374,+ | |||
|coexpression_cluster_id=C519 | |||
|description=CAGE_peak_10_at_SCUBE3_5end | |||
|id=chr6:35216360..35216374,+ | |||
|ontology_enrichment_celltype=CL:0002334!1.80e-18!12;CL:0000055!8.10e-12!180;CL:0000057!2.94e-11!75;CL:0002620!2.13e-08!23;CL:0002580!4.74e-08!3;CL:0002579!1.15e-07!3;CL:0000135!2.45e-07!3;CL:0000386!2.45e-07!3;CL:0000388!2.45e-07!3;CL:0000188!2.81e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.04e-62;12!CL:0002580;1.87e-35;3!CL:0002583;3.65e-25;2!CL:0002582;8.53e-17;3!CL:0002617;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,7.49e-62,12;CL:0002580,1.40e-35,3;CL:0002583,3.89e-25,2;CL:0002582,1.08e-16,3;CL:0000057,1.77e-11,76;CL:0000136,1.25e-07,15;CL:0002617,2.58e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;5.06e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,6.06e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.11e-08!45;UBERON:0002416!5.11e-08!45;UBERON:0000043!2.45e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;6.54e-19;10!UBERON:0001443;3.20e-17;11!UBERON:0002072;1.18e-10;5!UBERON:0003688;1.00e-08;6!UBERON:0002358;1.00e-08;6!UBERON:0003684;1.00e-08;6!UBERON:0001178;1.00e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.31e-19,10;UBERON:0001443,2.19e-17,11;UBERON:0002072,1.21e-10,5;UBERON:0003688,1.13e-08,6;UBERON:0002358,1.13e-08,6;UBERON:0003684,1.13e-08,6;UBERON:0001178,1.13e-08,6 | |||
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| ||
|short_description=p10@SCUBE3 | |||
}} | }} |
Latest revision as of 10:22, 18 September 2015
Short description: | p10@SCUBE3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SCUBE3_5end |
Coexpression cluster: | C519_Preadipocyte_Ewing_Myoblast_spindle_Fibroblast_Adipocyte_Osteoblast |
Association with transcript: | 0bp_to_BX537875_5end |
EntrezGene: | SCUBE3 |
HGNC: | 13655 |
UniProt: | Q7Z3I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 7.49e-62 | 12 |
preadipocyte of the breast | 1.40e-35 | 3 |
subcutaneous preadipocyte | 3.89e-25 | 2 |
visceral preadipocyte | 1.08e-16 | 3 |
fibroblast | 1.77e-11 | 76 |
fat cell | 1.25e-07 | 15 |
adipocyte of breast | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
breast | 4.31e-19 | 10 |
chest | 2.19e-17 | 11 |
hypodermis | 1.21e-10 | 5 |
omentum | 1.13e-08 | 6 |
peritoneum | 1.13e-08 | 6 |
abdominal cavity | 1.13e-08 | 6 |
visceral peritoneum | 1.13e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 6.06e-13 | 1 |