FFCP PHASE1:Hg19::chr8:53569012..53569034,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:53569012..53569034,-
|short_description=p2@RB1CC1
|description=CAGE_peak_2_at_RB1CC1_5end
|association_with_transcript=139bp_to_BC032074_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9821 | |EntrezGene=9821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15574 | |HGNC=15574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=139bp_to_BC032074_5end | |||
|cluster_id=chr8:53569012..53569034,- | |||
|description=CAGE_peak_2_at_RB1CC1_5end | |||
|id=chr8:53569012..53569034,- | |||
|ontology_enrichment_celltype=CL:0000860!7.16e-10!45;CL:0002057!2.23e-09!42;CL:0002194!8.93e-08!63;CL:0000576!8.93e-08!63;CL:0000040!8.93e-08!63;CL:0000559!8.93e-08!63;CL:0002009!5.14e-07!65;CL:0000766!9.60e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.41e-13;33!CL:0002057;6.41e-13;33!CL:0000473;3.89e-10;39!CL:0000234;3.89e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.58e-11,48;CL:0000234,3.58e-11,48;CL:0000860,4.15e-11,42;CL:0002057,4.15e-11,42;CL:0002194,8.99e-08,59;CL:0000576,8.99e-08,59;CL:0000040,8.99e-08,59;CL:0000559,8.99e-08,59;CL:0002009,3.68e-07,61;CL:0000766,6.24e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-08;42 | |||
|ontology_enrichment_disease=DOID:14566!4.56e-11!239;DOID:162!1.49e-10!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@RB1CC1 | |||
}} | }} |
Latest revision as of 11:41, 18 September 2015
Short description: | p2@RB1CC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RB1CC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_BC032074_5end |
EntrezGene: | RB1CC1 |
HGNC: | 15574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.58e-11 | 48 |
phagocyte | 3.58e-11 | 48 |
classical monocyte | 4.15e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.15e-11 | 42 |
monopoietic cell | 8.99e-08 | 59 |
monocyte | 8.99e-08 | 59 |
monoblast | 8.99e-08 | 59 |
promonocyte | 8.99e-08 | 59 |
macrophage dendritic cell progenitor | 3.68e-07 | 61 |
myeloid leukocyte | 6.24e-07 | 72 |