FFCP PHASE1:Hg19::chr7:38313235..38313268,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=445347 | |EntrezGene=445347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12279 | |HGNC=12279 | ||
|TSSclassifier=strong | |||
|UniProt=A2JGV3,Q0VGM3 | |UniProt=A2JGV3,Q0VGM3 | ||
|association_with_transcript=0bp_to_ENST00000390338,NM_001003799,NM_001003806,uc003tgb.2,uc003tgc.1_5end | |association_with_transcript=0bp_to_ENST00000390338,NM_001003799,NM_001003806,uc003tgb.2,uc003tgc.1_5end | ||
|cluster_id=chr7:38313235..38313268,- | |||
|coexpression_cluster_id=C245 | |||
|description=CAGE_peak_1_at_TRGJP_5end | |description=CAGE_peak_1_at_TRGJP_5end | ||
|id=chr7:38313235..38313268,- | |id=chr7:38313235..38313268,- | ||
|ontology_enrichment_celltype=CL:0000623!1.68e-19!3;CL:0000825!1.68e-19!3;CL:0002127!2.07e-07!1;CL:0000914!2.07e-07!1;CL:0000911!2.07e-07!1;CL:0000814!2.07e-07!1;CL:0002042!2.07e-07!1;CL:0002039!2.07e-07!1;CL:0002040!2.07e-07!1;CL:0002041!2.07e-07!1 | |ontology_enrichment_celltype=CL:0000623!1.68e-19!3;CL:0000825!1.68e-19!3;CL:0002127!2.07e-07!1;CL:0000914!2.07e-07!1;CL:0000911!2.07e-07!1;CL:0000814!2.07e-07!1;CL:0002042!2.07e-07!1;CL:0002039!2.07e-07!1;CL:0002040!2.07e-07!1;CL:0002041!2.07e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.39e-66;3!UBERON:0003353;2.39e-66;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!9.66e-09!3;UBERON:0000989!7.03e-08!1;UBERON:0008811!7.03e-08!1;UBERON:0006258!7.03e-08!1;UBERON:0005876!7.03e-08!1;UBERON:0004874!7.03e-08!1;UBERON:0002022!1.33e-07!1;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1 | |ontology_enrichment_uberon=UBERON:0000988!9.66e-09!3;UBERON:0000989!7.03e-08!1;UBERON:0008811!7.03e-08!1;UBERON:0006258!7.03e-08!1;UBERON:0005876!7.03e-08!1;UBERON:0004874!7.03e-08!1;UBERON:0002022!1.33e-07!1;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.25e-19;11!UBERON:0010147;2.25e-19;11!UBERON:0003937;6.76e-18;12!UBERON:0005399;6.76e-18;12!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22!UBERON:0000077;8.32e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.25e-19,11;UBERON:0010147,2.25e-19,11;UBERON:0009846,2.25e-19,11;UBERON:0003353,2.25e-19,11;UBERON:0004902,2.25e-19,11;UBERON:0003820,2.25e-19,11;UBERON:0009847,2.25e-19,11;UBERON:0003937,6.76e-18,12;UBERON:0005399,6.76e-18,12;UBERON:0000162,1.43e-15,14;UBERON:0001353,1.43e-15,14;UBERON:0000163,1.43e-15,14;UBERON:0006866,1.43e-15,14;UBERON:0000164,1.43e-15,14;UBERON:0000931,1.43e-15,14;UBERON:0004122,1.22e-14,15;UBERON:0001046,6.95e-12,19;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22;UBERON:0003064,1.52e-08,28;UBERON:0000077,2.67e-08,29;UBERON:0000161,5.81e-07,36;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p1@TRGJP | |short_description=p1@TRGJP | ||
}} | }} |
Latest revision as of 12:09, 18 September 2015
Short description: | p1@TRGJP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRGJP_5end |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | 0bp_to_ENST00000390338, NM_001003799, NM_001003806, uc003tgb.2, uc003tgc.1_5end |
EntrezGene: | TARP |
HGNC: | 12279 |
UniProt: | A2JGV3Q0VGM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.25e-19 | 11 |
male accessory sex gland | 2.25e-19 | 11 |
embryonic cloacal epithelium | 2.25e-19 | 11 |
epithelium of hindgut | 2.25e-19 | 11 |
urogenital sinus epithelium | 2.25e-19 | 11 |
prostate bud | 2.25e-19 | 11 |
prostate field | 2.25e-19 | 11 |
sex gland | 6.76e-18 | 12 |
male reproductive gland | 6.76e-18 | 12 |
cloaca | 1.43e-15 | 14 |
anal region | 1.43e-15 | 14 |
embryonic cloaca | 1.43e-15 | 14 |
terminal part of digestive tract | 1.43e-15 | 14 |
primitive urogenital sinus | 1.43e-15 | 14 |
proctodeum | 1.43e-15 | 14 |
genitourinary system | 1.22e-14 | 15 |
hindgut | 6.95e-12 | 19 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |
intermediate mesoderm | 1.52e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
epithelial bud | 8.21e-07 | 37 |