FFCP PHASE1:Hg19::chr10:5734756..5734804,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54906 | |EntrezGene=54906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23484 | |HGNC=23484 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000532424_5end | |association_with_transcript=0bp_to_ENST00000532424_5end | ||
|cluster_id=chr10:5734756..5734804,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_FAM208B_5end | |description=CAGE_peak_3_at_FAM208B_5end | ||
|id=chr10:5734756..5734804,+ | |id=chr10:5734756..5734804,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.42e-07;2!CL:0000558;4.42e-07;2!CL:0000453;5.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.93e-07,2;CL:0000765,3.93e-07,2;CL:0000050,3.93e-07,2;CL:0000038,3.93e-07,2;CL:0000558,3.93e-07,2;CL:0000547,3.93e-07,2;CL:0000549,3.93e-07,2;CL:0000550,3.93e-07,2;CL:0000552,3.93e-07,2;CL:0000453,5.69e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.34e-16!115;UBERON:0002780!1.41e-11!41;UBERON:0001890!1.41e-11!41;UBERON:0006240!1.41e-11!41;UBERON:0001049!3.04e-11!57;UBERON:0005068!3.04e-11!57;UBERON:0006241!3.04e-11!57;UBERON:0007135!3.04e-11!57;UBERON:0002616!3.41e-11!59;UBERON:0003080!5.44e-11!42;UBERON:0001017!7.57e-11!82;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0000073!1.18e-10!94;UBERON:0001016!1.18e-10!94;UBERON:0005743!3.76e-10!86;UBERON:0001893!5.92e-10!34;UBERON:0002020!6.32e-10!34;UBERON:0003528!6.32e-10!34;UBERON:0001869!1.71e-09!32;UBERON:0002791!1.97e-09!33;UBERON:0000153!1.63e-07!129;UBERON:0007811!1.63e-07!129;UBERON:0002346!2.51e-07!90;UBERON:0003056!2.91e-07!61;UBERON:0000033!3.03e-07!123;UBERON:0003075!7.19e-07!86;UBERON:0007284!7.19e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!3.34e-16!115;UBERON:0002780!1.41e-11!41;UBERON:0001890!1.41e-11!41;UBERON:0006240!1.41e-11!41;UBERON:0001049!3.04e-11!57;UBERON:0005068!3.04e-11!57;UBERON:0006241!3.04e-11!57;UBERON:0007135!3.04e-11!57;UBERON:0002616!3.41e-11!59;UBERON:0003080!5.44e-11!42;UBERON:0001017!7.57e-11!82;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0000073!1.18e-10!94;UBERON:0001016!1.18e-10!94;UBERON:0005743!3.76e-10!86;UBERON:0001893!5.92e-10!34;UBERON:0002020!6.32e-10!34;UBERON:0003528!6.32e-10!34;UBERON:0001869!1.71e-09!32;UBERON:0002791!1.97e-09!33;UBERON:0000153!1.63e-07!129;UBERON:0007811!1.63e-07!129;UBERON:0002346!2.51e-07!90;UBERON:0003056!2.91e-07!61;UBERON:0000033!3.03e-07!123;UBERON:0003075!7.19e-07!86;UBERON:0007284!7.19e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.47e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.07e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0.74259811776028,0.662794751455832,0,0,0,0.975865597581014,0.123121058076788,0,0,0,0.410623275218653,0.376627918784408,1.45185470921107,1.23150884174919,1.10195093839151,0,0.383829398097213,0.464448369948228,0.919421224478927,0.30120591877825,0.739508020333575,0,1.42169232487422,0,0,0.601633342410425,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,1.1384259382189,2.34894875748376,2.29363936875137,1.32171328579026,3.36305137788922,0,0.393419540227666,2.35806457649499,0.616804496998528,0.167186495390678,0,0.946895611469467,0,0.222820913770347,0,0.443067789167242,0.541607727530031,0.25618263945135,0.260118695119756,0.328875809207352,0.276350017785848,0.579606171470105,0.296573126324121,0,0,0.453237370790265,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.472674085820339,0,0.087834785693126,3.01251873644739,0.364295288292542,0,0,0,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,1.20848795132744,1.52054421143703,0.488124115096339,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,1.00973509697646,0.276149695926898,0,0.355009592516614,0.201504196455281,0.169560592310488,0.193260853163297,0,0.286804595389004,0.121973706129595,0.265059536642971,0.232387885739037,0,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0.648119116109707,0,0,0,0.34779121492523,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0.246217006087397,0,0.594524649154913,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,1.00034104211935,0,0,0,0,0.35142424497814,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0.262248829918848,0,0.847168708148562,0,1.46139224653261,0.527758144464379,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,1.97333888981341,1.0457418040996,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,1.18162269355101,0.725083469571143,0.170453254832202,0,0.165284915360978,0.192190067365106,0.893288987462089,0.30347334256665,0.929691098594572,1.25924938732256,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0.409499734223957,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0.689170200620878,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0.284567373393656,0,0.199579371432817,0,0.846694330895531,0.973865820823666,2.24637742490767,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.540911356951966,1.33228787199128,0,0,0.146508179271894,0,0.222886768554957,0,0.47748896947538,0.296964680832639,0.307160702099232,0.994147647766298,0,0,0,0,0,0,0,0.613612095012929,0.492339221844278,1.55519793830904,0,0,0,0.295930216910801,0,0,0.969332746095218,0.834912883456661,0,0,0,0,4.09656413827799,0,1.18193840883968,0,0,0,0.885741385813839,0.60298219312704,0,0.552896299656123,0,1.09692698576986,0,0,0.307801034015188,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0.664846727600626,0,0.19606253431774,0.335643173951685,0.37950746544837,0.158936578980379,0.843992258112108,2.28525931422807,0.282706142867882,0,3.98104772431402,0.530745387020035,1.22206028986725,0.593042257361244,0.617819694732514,0.313265848516366,0.741412462787447,0,0.234264445725339,0.364909578431332,0,0,0.789168805698781,0,0,0.758238955541855,0,0.103688191397247,0,0.661983911750998,0,0,0,0,0,1.56787835863004,0.34823682632161,0.17472666824203,0,0,0,0,0.581934098930517,0,0.90392296312213,0,0,0.696418755514666,0,0,0,0.39961921916426,0.144090417154106,0.114536596165916,2.23073497220554,0,1.36677789121976,0.235694034616795,0,0,0,0,1.80126086612937,0.136905378891993,0,0.429765441419957,0.525774708558629,0,0,0,1.99679000498991,0,0,0.335917362433631,0,1.16495949527454,0.630265458457789,0.5769110086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| ||
|short_description=p3@FAM208B | |short_description=p3@FAM208B | ||
}} | }} |
Latest revision as of 13:46, 18 September 2015
Short description: | p3@FAM208B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM208B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000532424_5end |
EntrezGene: | FAM208B |
HGNC: | 23484 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.93e-07 | 2 |
erythroblast | 3.93e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.93e-07 | 2 |
erythroid progenitor cell | 3.93e-07 | 2 |
reticulocyte | 3.93e-07 | 2 |
proerythroblast | 3.93e-07 | 2 |
basophilic erythroblast | 3.93e-07 | 2 |
polychromatophilic erythroblast | 3.93e-07 | 2 |
orthochromatic erythroblast | 3.93e-07 | 2 |
Langerhans cell | 5.69e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 9.07e-07 | 8 |