FFCP PHASE1:Hg19::chr5:73158863..73158872,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64283 | |EntrezGene=64283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506334_5end | |association_with_transcript=0bp_to_ENST00000506334_5end | ||
|cluster_id=chr5:73158863..73158872,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_11_at_RGNEF_5end | |description=CAGE_peak_11_at_RGNEF_5end | ||
|id=chr5:73158863..73158872,+ | |id=chr5:73158863..73158872,+ | ||
|ontology_enrichment_celltype=CL:0000136!2.85e-19!15;CL:0002617!5.09e-10!2;CL:0002540!1.42e-07!6;CL:0002615!2.68e-07!3;CL:0002579!4.01e-07!3 | |ontology_enrichment_celltype=CL:0000136!2.85e-19!15;CL:0002617!5.09e-10!2;CL:0002540!1.42e-07!6;CL:0002615!2.68e-07!3;CL:0002579!4.01e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.18e-27;13!CL:0002615;1.26e-08;3!CL:0002579;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.59e-24,15;CL:0002579,1.40e-08,3;CL:0002615,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.85e-07;4!UBERON:0007284;8.85e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!4.33e-15!3;UBERON:0009751!4.33e-15!3;UBERON:0000946!4.33e-15!3;UBERON:0002523!4.33e-15!3;UBERON:0005983!4.33e-15!3;UBERON:0002165!4.33e-15!3;UBERON:0002062!4.33e-15!3;UBERON:0007280!4.33e-15!3;UBERON:0003688!9.06e-13!6;UBERON:0002358!9.06e-13!6;UBERON:0003684!9.06e-13!6;UBERON:0001178!9.06e-13!6;UBERON:0002081!1.14e-10!2;UBERON:0002133!1.83e-10!2;UBERON:0007100!1.18e-07!27;UBERON:0007023!1.24e-07!115;UBERON:0004151!2.22e-07!3 | |ontology_enrichment_uberon=UBERON:0003978!4.33e-15!3;UBERON:0009751!4.33e-15!3;UBERON:0000946!4.33e-15!3;UBERON:0002523!4.33e-15!3;UBERON:0005983!4.33e-15!3;UBERON:0002165!4.33e-15!3;UBERON:0002062!4.33e-15!3;UBERON:0007280!4.33e-15!3;UBERON:0003688!9.06e-13!6;UBERON:0002358!9.06e-13!6;UBERON:0003684!9.06e-13!6;UBERON:0001178!9.06e-13!6;UBERON:0002081!1.14e-10!2;UBERON:0002133!1.83e-10!2;UBERON:0007100!1.18e-07!27;UBERON:0007023!1.24e-07!115;UBERON:0004151!2.22e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;3.67e-23;1!UBERON:0005623;3.67e-23;1!UBERON:0003688;1.41e-15;6!UBERON:0002358;1.41e-15;6!UBERON:0003684;1.41e-15;6!UBERON:0001178;1.41e-15;6!UBERON:0004457;1.02e-10;9!UBERON:0000042;1.02e-10;9!UBERON:0003978;1.26e-08;3!UBERON:0000946;1.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.62e-23,1;UBERON:0005623,2.62e-23,1;UBERON:0003688,1.89e-15,6;UBERON:0002358,1.89e-15,6;UBERON:0003684,1.89e-15,6;UBERON:0001178,1.89e-15,6;UBERON:0003978,1.12e-08,3;UBERON:0009751,1.12e-08,3;UBERON:0000946,1.12e-08,3;UBERON:0002523,1.12e-08,3;UBERON:0005983,1.12e-08,3;UBERON:0002165,1.12e-08,3;UBERON:0002062,1.12e-08,3;UBERON:0007280,1.12e-08,3;UBERON:0004457,3.30e-08,12;UBERON:0000042,3.30e-08,12 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,1.02341449813341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.3749625440701,0.717873024576814,0,0.858452096273142,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,12.0331149130896,7.65863941908654,2.62298104567844,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,1.02341449813341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.3749625440701,0.717873024576814,0,0.858452096273142,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,12.0331149130896,7.65863941908654,2.62298104567844,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p11@RGNEF | |short_description=p11@RGNEF | ||
}} | }} |
Latest revision as of 16:19, 18 September 2015
Short description: | p11@RGNEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RGNEF_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000506334_5end |
EntrezGene: | RGNEF |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.59e-24 | 15 |
omentum preadipocyte | 1.40e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.62e-23 | 1 |
semi-lunar valve | 2.62e-23 | 1 |
omentum | 1.89e-15 | 6 |
peritoneum | 1.89e-15 | 6 |
abdominal cavity | 1.89e-15 | 6 |
visceral peritoneum | 1.89e-15 | 6 |
valve | 1.12e-08 | 3 |
cardiac mesenchyme | 1.12e-08 | 3 |
cardial valve | 1.12e-08 | 3 |
tunica intima | 1.12e-08 | 3 |
heart layer | 1.12e-08 | 3 |
endocardium | 1.12e-08 | 3 |
endocardial cushion | 1.12e-08 | 3 |
presumptive endocardium | 1.12e-08 | 3 |
cavity lining | 3.30e-08 | 12 |
serous membrane | 3.30e-08 | 12 |