FFCP PHASE1:Hg19::chr19:45826125..45826141,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1158 | |EntrezGene=1158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1994 | |HGNC=1994 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002pbd.2_5end | |association_with_transcript=0bp_to_uc002pbd.2_5end | ||
|cluster_id=chr19:45826125..45826141,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_1_at_CKM_5end | |description=CAGE_peak_1_at_CKM_5end | ||
|id=chr19:45826125..45826141,- | |id=chr19:45826125..45826141,- | ||
|ontology_enrichment_celltype=CL:0000188!1.48e-09!9 | |ontology_enrichment_celltype=CL:0000188!1.48e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;9.58e-14;9!CL:0000680;8.07e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,9.51e-14,9 | |||
|ontology_enrichment_development_v019=UBERON:0006603;4.93e-08;65!UBERON:0003056;5.54e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-19!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.45e-23;16!UBERON:0002036;1.45e-23;16!UBERON:0002385;1.59e-13;31!UBERON:0001015;1.59e-13;31!UBERON:0000383;1.59e-13;31!UBERON:0004151;6.24e-08;3!UBERON:0003978;8.16e-08;3!UBERON:0000946;8.16e-08;3!UBERON:0004921;2.11e-07;33!UBERON:0000922;2.55e-07;49!UBERON:0006947;7.39e-07;3!UBERON:0004054;7.39e-07;3!UBERON:0007023;9.19e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.21e-21,114;UBERON:0004151,6.25e-08,3;UBERON:0003978,8.17e-08,3;UBERON:0009751,8.17e-08,3;UBERON:0000946,8.17e-08,3;UBERON:0002523,8.17e-08,3;UBERON:0005983,8.17e-08,3;UBERON:0002165,8.17e-08,3;UBERON:0002062,8.17e-08,3;UBERON:0007280,8.17e-08,3;UBERON:0003103,4.75e-07,68;UBERON:0006947,7.55e-07,3;UBERON:0004054,7.55e-07,3 | |||
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| ||
|short_description=p1@CKM | |short_description=p1@CKM | ||
}} | }} |
Latest revision as of 16:53, 18 September 2015
Short description: | p1@CKM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CKM_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_uc002pbd.2_5end |
EntrezGene: | CKM |
HGNC: | 1994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 9.51e-14 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.21e-21 | 114 |
cardiac chamber | 6.25e-08 | 3 |
valve | 8.17e-08 | 3 |
cardiac mesenchyme | 8.17e-08 | 3 |
cardial valve | 8.17e-08 | 3 |
tunica intima | 8.17e-08 | 3 |
heart layer | 8.17e-08 | 3 |
endocardium | 8.17e-08 | 3 |
endocardial cushion | 8.17e-08 | 3 |
presumptive endocardium | 8.17e-08 | 3 |
compound organ | 4.75e-07 | 68 |
male genital duct | 7.55e-07 | 3 |
internal male genitalia | 7.55e-07 | 3 |