FFCP PHASE1:Hg19::chr8:63951336..63951445,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4248 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000518966,ENST00000520609,ENST00000523788_5end | |||
|cluster_id=chr8:63951336..63951445,- | |||
|description=CAGE_peak_1_at_GGH_5end | |||
|id=chr8:63951336..63951445,- | |||
|ontology_enrichment_celltype=CL:0000220!3.79e-12!246;CL:0000055!3.83e-12!180;CL:0002321!9.06e-12!248;CL:0000548!3.46e-10!679;CL:0000004!3.46e-10!679;CL:0000255!3.46e-10!679;CL:0000066!7.87e-10!254;CL:0000012!8.42e-10!682 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.11e-11,250;CL:0000066,4.47e-10,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.79e-23!239;DOID:162!4.25e-23!235;DOID:0050686!6.81e-13!137;DOID:0050687!2.15e-09!143;DOID:305!3.72e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.43e-23,239;DOID:162,3.85e-23,235;DOID:0050686,6.43e-13,137;DOID:0050687,2.09e-09,143;DOID:305,3.64e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.98e-07;9!UBERON:0001557;7.98e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,5.33e-07,148;UBERON:0001737,8.00e-07,9 | |||
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| |||
|short_description=p1@GGH | |||
}} |
Latest revision as of 18:26, 18 September 2015
Short description: | p1@GGH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GGH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518966, ENST00000520609, ENST00000523788_5end |
EntrezGene: | GGH |
HGNC: | 4248 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.11e-11 | 250 |
epithelial cell | 4.47e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 5.33e-07 | 148 |
larynx | 8.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.43e-23 | 239 |
cancer | 3.85e-23 | 235 |
organ system cancer | 6.43e-13 | 137 |
cell type cancer | 2.09e-09 | 143 |
carcinoma | 3.64e-07 | 106 |