FFCP PHASE1:Hg19::chr7:45953149..45953156,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:45953149..45953156,-
|short_description=p24@IGFBP3
|description=CAGE_peak_24_at_IGFBP3_5end
|association_with_transcript=-473bp_to_S56205_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-473bp_to_S56205_5end | |||
|cluster_id=chr7:45953149..45953156,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_24_at_IGFBP3_5end | |||
|id=chr7:45953149..45953156,- | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-11!180;CL:0000057!1.95e-11!75;CL:0000153!1.62e-09!9;CL:0000447!1.62e-09!9;CL:0002620!2.22e-08!23;CL:0000667!5.05e-08!6;CL:0000058!5.05e-08!6;CL:0000138!5.05e-08!6;CL:0000499!1.54e-07!27;CL:0000327!4.44e-07!14;CL:0000136!6.65e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.62e-27;6!CL:0000153;4.69e-25;9!CL:0000447;4.69e-25;9!CL:0002620;5.61e-20;23!CL:0000327;8.10e-15;15!CL:0000499;2.82e-13;28!CL:0002617;5.85e-13;2!CL:0002595;2.34e-11;5!CL:0000135;3.51e-09;3!CL:0000388;3.51e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.29e-27,6;CL:0000138,7.29e-27,6;CL:0000153,3.76e-25,9;CL:0000447,3.76e-25,9;CL:0002620,4.75e-20,23;CL:0000327,7.12e-15,15;CL:0000499,2.86e-13,28;CL:0002617,9.55e-13,2;CL:0002595,2.39e-11,5;CL:0000057,6.78e-11,76;CL:0000135,4.50e-09,3;CL:0000388,4.50e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.79e-09!5;DOID:450!5.79e-09!5;DOID:66!5.79e-09!5;DOID:423!5.79e-09!5;DOID:0080000!5.79e-09!5;DOID:11722!5.79e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.41e-11;5!DOID:450;1.41e-11;5!DOID:66;1.41e-11;5!DOID:423;1.41e-11;5!DOID:0080000;1.41e-11;5!DOID:11722;1.41e-11;5!DOID:2513;2.57e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.08e-11,5;DOID:450,1.08e-11,5;DOID:66,1.08e-11,5;DOID:423,1.08e-11,5;DOID:0080000,1.08e-11,5;DOID:11722,1.08e-11,5;DOID:2513,1.42e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004457!5.91e-07!12;UBERON:0000042!5.91e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.34e-11;5!UBERON:0001533;2.34e-11;5!UBERON:0002097;5.93e-11;41!UBERON:0007846;3.51e-09;3!UBERON:0000043;3.51e-09;3!UBERON:0007845;3.51e-09;3!UBERON:0003513;2.99e-08;7!UBERON:0002199;1.02e-07;46!UBERON:0002416;1.02e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.70e-13,41;UBERON:0002199,1.54e-11,46;UBERON:0002416,1.54e-11,46;UBERON:0003834,2.39e-11,5;UBERON:0001533,2.39e-11,5;UBERON:0007846,4.50e-09,3;UBERON:0000043,4.50e-09,3;UBERON:0007845,4.50e-09,3;UBERON:0003513,3.04e-08,7 | |||
|phase1_expression=1.09007027562334,1.2846031433459,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,10.843174571537,12.0321098552613,8.40109809972778,2.3858578411533,3.40644409211845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0.560677600142307,1.06748995729705,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.30648779579902,0,0.226864366320042,1.79389635688862,0.85422955527427,1.27159140695737,2.70081986475962,0.721367704669072,1.03056216018252,1.67505170698431,0,0.487185025805993,2.27190396819703,1.47279837827679,0,2.84007674013291,1.5112814734146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,1.40330047216537,0.384417447767103,0,0.321707842287215,0,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0.429374660225974,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,1.10273068709225,1.32687795048244,1.75380354101505,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,1.68886108238131,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.95497793895076,1.78178808499583,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,1.9980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,1.77962244319307,0.457680136793847,0.453692771289717,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0,0,0,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,1.07963795609311,3.34426181520935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0.0644578879735772,0,0.357107877211315,0,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.449126010532934,0,0,0,0,0,0 | |phase1_expression=1.09007027562334,1.2846031433459,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,10.843174571537,12.0321098552613,8.40109809972778,2.3858578411533,3.40644409211845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0.560677600142307,1.06748995729705,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.30648779579902,0,0.226864366320042,1.79389635688862,0.85422955527427,1.27159140695737,2.70081986475962,0.721367704669072,1.03056216018252,1.67505170698431,0,0.487185025805993,2.27190396819703,1.47279837827679,0,2.84007674013291,1.5112814734146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,1.40330047216537,0.384417447767103,0,0.321707842287215,0,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0.429374660225974,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,1.10273068709225,1.32687795048244,1.75380354101505,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,1.68886108238131,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.95497793895076,1.78178808499583,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,1.9980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,1.77962244319307,0.457680136793847,0.453692771289717,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0,0,0,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,1.07963795609311,3.34426181520935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0.0644578879735772,0,0.357107877211315,0,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p24@IGFBP3 | |||
}} | }} |
Latest revision as of 19:35, 18 September 2015
Short description: | p24@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -473bp_to_S56205_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.29e-27 | 6 |
chondrocyte | 7.29e-27 | 6 |
GAG secreting cell | 3.76e-25 | 9 |
carbohydrate secreting cell | 3.76e-25 | 9 |
skin fibroblast | 4.75e-20 | 23 |
extracellular matrix secreting cell | 7.12e-15 | 15 |
stromal cell | 2.86e-13 | 28 |
adipocyte of breast | 9.55e-13 | 2 |
smooth muscle cell of the subclavian artery | 2.39e-11 | 5 |
fibroblast | 6.78e-11 | 76 |
fibrocyte | 4.50e-09 | 3 |
tendon cell | 4.50e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.70e-13 | 41 |
integument | 1.54e-11 | 46 |
integumental system | 1.54e-11 | 46 |
thoracic segment blood vessel | 2.39e-11 | 5 |
subclavian artery | 2.39e-11 | 5 |
dense regular connective tissue | 4.50e-09 | 3 |
tendon | 4.50e-09 | 3 |
regular connective tissue | 4.50e-09 | 3 |
trunk blood vessel | 3.04e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.08e-11 | 5 |
myotonic disease | 1.08e-11 | 5 |
muscle tissue disease | 1.08e-11 | 5 |
myopathy | 1.08e-11 | 5 |
muscular disease | 1.08e-11 | 5 |
myotonic dystrophy | 1.08e-11 | 5 |
basal cell carcinoma | 1.42e-07 | 1 |