FFCP PHASE1:Hg19::chr8:67039205..67039215,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14215 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BYV6 | |||
|association_with_transcript=-62bp_to_ENST00000276573,ENST00000350034,NM_033058,NM_184085,NM_184086,NM_184087,uc003xvu.2,uc003xvv.2,uc003xvw.2,uc003xvx.2_5end | |||
|cluster_id=chr8:67039205..67039215,+ | |||
|description=CAGE_peak_5_at_TRIM55_5end | |||
|id=chr8:67039205..67039215,+ | |||
|ontology_enrichment_celltype=CL:0000515!4.39e-08!4;CL:0002589!8.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000228;8.64e-26;1!CL:0002372;8.64e-26;1!CL:0000346;1.60e-09;3!CL:1000428;1.60e-09;3!CL:0000056;1.86e-07;4!CL:0000737;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,7.62e-26,1;CL:0002372,7.62e-26,1;CL:0000346,1.41e-09,3;CL:1000428,1.41e-09,3;CL:0000737,1.80e-07,4;CL:0000515,1.80e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.77e-11;10!UBERON:0007687;6.77e-11;10!CL:0000515;1.86e-07;4 | |||
|ontology_enrichment_disease=DOID:0060058!6.74e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:4468;9.40e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.40e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!3.41e-10!27;UBERON:0003918!3.41e-10!27;UBERON:0005095!3.41e-10!27;UBERON:0007687!3.41e-10!27;UBERON:0003103!2.05e-09!69;UBERON:0000489!2.76e-08!32;UBERON:0001529!8.36e-07!2;UBERON:0007204!8.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.60e-09;3!UBERON:0001992;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.41e-09,3;UBERON:0001992,1.41e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,6.53978469442139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0,0,0,0,0,0,0,0,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01138275443188,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,2.61172493054636,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0.485560759068186,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0.714695326373367,0.662091970365432,1.27134268827375,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45484145949794,0.47775168788705,0,0,0.581207126840626,0.173858272302579,0,0,0,0,0,0,0,0,0.4582137370881,0.93061915699296,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,1.00918676322552,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@TRIM55 | |||
}} |
Latest revision as of 20:40, 18 September 2015
Short description: | p5@TRIM55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM55_5end |
Coexpression cluster: | NA |
Association with transcript: | -62bp_to_ENST00000276573, ENST00000350034, NM_033058, NM_184085, NM_184086, NM_184087, uc003xvu.2, uc003xvv.2, uc003xvw.2, uc003xvx.2_5end |
EntrezGene: | TRIM55 |
HGNC: | 14215 |
UniProt: | Q9BYV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 7.62e-26 | 1 |
myotube | 7.62e-26 | 1 |
hair follicle dermal papilla cell | 1.41e-09 | 3 |
stem cell of epidermis | 1.41e-09 | 3 |
striated muscle cell | 1.80e-07 | 4 |
skeletal muscle myoblast | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.41e-09 | 3 |
papillary layer of dermis | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.40e-14 | 2 |