FFCP PHASE1:Hg19::chr4:79860448..79860465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152559 | |EntrezGene=152559 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30130 | |HGNC=30130 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000512760_5end | |association_with_transcript=47bp_to_ENST00000512760_5end | ||
|cluster_id=chr4:79860448..79860465,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_PAQR3_5end | |description=CAGE_peak_4_at_PAQR3_5end | ||
|id=chr4:79860448..79860465,- | |id=chr4:79860448..79860465,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.55e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.04e-15,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.82e-12!94;UBERON:0001016!1.82e-12!94;UBERON:0001017!3.08e-11!82;UBERON:0005743!3.58e-10!86;UBERON:0000955!2.48e-09!69;UBERON:0006238!2.48e-09!69;UBERON:0002616!1.05e-07!59;UBERON:0001049!2.14e-07!57;UBERON:0005068!2.14e-07!57;UBERON:0006241!2.14e-07!57;UBERON:0007135!2.14e-07!57 | |ontology_enrichment_uberon=UBERON:0000073!1.82e-12!94;UBERON:0001016!1.82e-12!94;UBERON:0001017!3.08e-11!82;UBERON:0005743!3.58e-10!86;UBERON:0000955!2.48e-09!69;UBERON:0006238!2.48e-09!69;UBERON:0002616!1.05e-07!59;UBERON:0001049!2.14e-07!57;UBERON:0005068!2.14e-07!57;UBERON:0006241!2.14e-07!57;UBERON:0007135!2.14e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001954;1.78e-15;2!UBERON:0003022;1.78e-15;2!UBERON:0002421;1.78e-15;2!UBERON:0002600;1.78e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0000349;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-15,2;UBERON:0003022,1.78e-15,2;UBERON:0002421,1.78e-15,2;UBERON:0002600,1.78e-15,2;UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0000349,5.70e-07,5 | |||
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|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,2.68507104770311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0,0,0,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0.128343036279748,0,1.30139853857622,2.31986643833309,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0.362578348774867,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0.413509717453592,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0.649243880549111,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.334330152832435,0.284136146806413,0,0,0,0,0.281338832821026,0.333926115068718,0,0.422250816255987,0,0.276283915531148,0,0.306806047506464,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.442317039724898,0.886642856860642,0,0.21787692703798,0,0,0,0.23056390438806,0,0.217294743844016,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0,0,0.261177619741208,0,0,0.0967563312890851,0.0730893170861856,0,0,0.176512253383001,0,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0,0,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,2.38568906942791,0,0.160753148465019,0.137539436597234,0,0,0,0.242998226632099,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0.138348634936231,0.124980407962107,0,0,0,0,0.28984205722165,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0.303859956177382,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0.511577485214607,0.323474434190045,0.157265941855896,0.436838552768056,0.169732529954025,0,0,0,0,0.0788617450012534,0.80057074828547,0,0.3062454773532,0.449604575675217,0,0.319267718114302,0,0.252071696221718,0.622415272177961,0.322951291263702,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0.197318320688547,0.118193840883968,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0.301925687133347,0,0,0.470317296361523,0.245148321753905,0.471353094203252,0.196308467114945,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0,0.271965960763659,0,0,0,0,0,0.252332849670158,0,0.633492505057185,0,0,0.36757959813938,0,5.91073846102267,7.77095977452918,0.829169439458779,0,0.213233981900981,0,0,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0,0,0,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| ||
|short_description=p4@PAQR3 | |short_description=p4@PAQR3 | ||
}} | }} |
Latest revision as of 21:08, 18 September 2015
Short description: | p4@PAQR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAQR3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 47bp_to_ENST00000512760_5end |
EntrezGene: | PAQR3 |
HGNC: | 30130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.04e-15 | 8 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.78e-15 | 2 |
lobe parts of cerebral cortex | 1.78e-15 | 2 |
hippocampal formation | 1.78e-15 | 2 |
limbic lobe | 1.78e-15 | 2 |
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
limbic system | 5.70e-07 | 5 |