FFCP PHASE1:Hg19::chr14:106845840..106845851,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5598 | |HGNC=5598 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000390617_5end | |association_with_transcript=-51bp_to_ENST00000390617_5end | ||
|cluster_id=chr14:106845840..106845851,- | |||
|coexpression_cluster_id=C218 | |coexpression_cluster_id=C218 | ||
|description=CAGE_peak_1_at_IGHV3-35_5end | |description=CAGE_peak_1_at_IGHV3-35_5end | ||
|id=chr14:106845840..106845851,- | |id=chr14:106845840..106845851,- | ||
|ontology_enrichment_celltype=CL:0000945!5.50e-07!24;CL:0000826!5.50e-07!24 | |ontology_enrichment_celltype=CL:0000945!5.50e-07!24;CL:0000826!5.50e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.56e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.56e-09,24;CL:0000826,2.56e-09,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-19!115;UBERON:0002106!7.85e-10!3;UBERON:0004854!7.85e-10!3;UBERON:0009034!7.85e-10!3;UBERON:0002095!7.85e-10!3;UBERON:0004782!7.85e-10!3;UBERON:0003281!7.85e-10!3;UBERON:0009664!7.85e-10!3;UBERON:0002296!7.85e-10!3;UBERON:0005602!7.85e-10!3;UBERON:0001179!7.85e-10!3;UBERON:0006293!7.85e-10!3;UBERON:0002372!1.77e-08!1;UBERON:0001961!1.77e-08!1;UBERON:0001744!1.77e-08!1;UBERON:0001735!1.77e-08!1;UBERON:0000029!3.34e-08!1;UBERON:0001736!3.83e-08!1;UBERON:0006298!3.83e-08!1;UBERON:0002171!4.40e-08!1;UBERON:0006518!4.40e-08!1;UBERON:0008949!4.40e-08!1;UBERON:0000101!4.40e-08!1;UBERON:0002167!4.40e-08!1;UBERON:0001154!5.79e-08!1;UBERON:0001153!5.79e-08!1;UBERON:0002363!9.29e-08!1;UBERON:0007647!9.29e-08!1;UBERON:0010115!9.29e-08!1;UBERON:0006834!9.94e-08!1;UBERON:0001155!1.91e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!2.33e-19!115;UBERON:0002106!7.85e-10!3;UBERON:0004854!7.85e-10!3;UBERON:0009034!7.85e-10!3;UBERON:0002095!7.85e-10!3;UBERON:0004782!7.85e-10!3;UBERON:0003281!7.85e-10!3;UBERON:0009664!7.85e-10!3;UBERON:0002296!7.85e-10!3;UBERON:0005602!7.85e-10!3;UBERON:0001179!7.85e-10!3;UBERON:0006293!7.85e-10!3;UBERON:0002372!1.77e-08!1;UBERON:0001961!1.77e-08!1;UBERON:0001744!1.77e-08!1;UBERON:0001735!1.77e-08!1;UBERON:0000029!3.34e-08!1;UBERON:0001736!3.83e-08!1;UBERON:0006298!3.83e-08!1;UBERON:0002171!4.40e-08!1;UBERON:0006518!4.40e-08!1;UBERON:0008949!4.40e-08!1;UBERON:0000101!4.40e-08!1;UBERON:0002167!4.40e-08!1;UBERON:0001154!5.79e-08!1;UBERON:0001153!5.79e-08!1;UBERON:0002363!9.29e-08!1;UBERON:0007647!9.29e-08!1;UBERON:0010115!9.29e-08!1;UBERON:0006834!9.94e-08!1;UBERON:0001155!1.91e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.10e-50;1!UBERON:0001961;3.10e-50;1!UBERON:0001744;3.10e-50;1!UBERON:0001042;3.10e-50;1!UBERON:0001735;3.10e-50;1!UBERON:0006562;6.30e-26;2!UBERON:0001155;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.42e-50,1;UBERON:0001961,2.42e-50,1;UBERON:0001744,2.42e-50,1;UBERON:0001735,2.42e-50,1;UBERON:0001155,8.37e-07,9 | |||
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|short_description=p1@IGHV3-35 | |short_description=p1@IGHV3-35 | ||
}} | }} |
Latest revision as of 22:37, 18 September 2015
Short description: | p1@IGHV3-35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV3-35_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | -51bp_to_ENST00000390617_5end |
EntrezGene: | NA |
HGNC: | 5598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.56e-09 | 24 |
pro-B cell | 2.56e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.42e-50 | 1 |
mucosa-associated lymphoid tissue | 2.42e-50 | 1 |
lymphoid tissue | 2.42e-50 | 1 |
tonsillar ring | 2.42e-50 | 1 |
colon | 8.37e-07 | 9 |