FFCP PHASE1:Hg19::chr17:18087231..18087246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54890 | |EntrezGene=54890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25996 | |HGNC=25996 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000399138_5end | |association_with_transcript=-42bp_to_ENST00000399138_5end | ||
|cluster_id=chr17:18087231..18087246,+ | |||
|description=CAGE_peak_4_at_ALKBH5_5end | |description=CAGE_peak_4_at_ALKBH5_5end | ||
|id=chr17:18087231..18087246,+ | |id=chr17:18087231..18087246,+ | ||
|ontology_enrichment_celltype=CL:0000359!6.31e-07!32 | |ontology_enrichment_celltype=CL:0000359!6.31e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.27e-07;32 | |ontology_enrichment_celltype_v019=CL:0000359;8.27e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.43e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.16e-09!42;UBERON:0003509!1.16e-09!42;UBERON:0004572!1.16e-09!42;UBERON:0004872!5.14e-08!84;UBERON:0007023!1.09e-07!115;UBERON:0001981!1.67e-07!60;UBERON:0007500!1.67e-07!60;UBERON:0004537!1.67e-07!60;UBERON:0006965!1.67e-07!60;UBERON:0004573!2.61e-07!33;UBERON:0004571!2.61e-07!33 | |ontology_enrichment_uberon=UBERON:0001637!1.16e-09!42;UBERON:0003509!1.16e-09!42;UBERON:0004572!1.16e-09!42;UBERON:0004872!5.14e-08!84;UBERON:0007023!1.09e-07!115;UBERON:0001981!1.67e-07!60;UBERON:0007500!1.67e-07!60;UBERON:0004537!1.67e-07!60;UBERON:0006965!1.67e-07!60;UBERON:0004573!2.61e-07!33;UBERON:0004571!2.61e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.84e-07;42!UBERON:0003509;2.84e-07;42!UBERON:0004572;2.84e-07;42!UBERON:0004573;7.21e-07;33!UBERON:0004571;7.21e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0001637;2.84e-07;42!UBERON:0003509;2.84e-07;42!UBERON:0004572;2.84e-07;42!UBERON:0004573;7.21e-07;33!UBERON:0004571;7.21e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,8.30e-10,42;UBERON:0003509,8.30e-10,42;UBERON:0004572,8.30e-10,42;UBERON:0004872,6.22e-08,83;UBERON:0007023,9.45e-08,114;UBERON:0004573,2.00e-07,33;UBERON:0004571,2.00e-07,33;UBERON:0007500,3.31e-07,59;UBERON:0001981,3.31e-07,59;UBERON:0004537,3.31e-07,59;UBERON:0006965,3.31e-07,59 | |||
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| ||
|short_description=p4@ALKBH5 | |short_description=p4@ALKBH5 | ||
}} | }} |
Latest revision as of 22:42, 18 September 2015
Short description: | p4@ALKBH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALKBH5_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000399138_5end |
EntrezGene: | ALKBH5 |
HGNC: | 25996 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.43e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
artery | 8.30e-10 | 42 |
arterial blood vessel | 8.30e-10 | 42 |
arterial system | 8.30e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 6.22e-08 | 83 |
adult organism | 9.45e-08 | 114 |
systemic artery | 2.00e-07 | 33 |
systemic arterial system | 2.00e-07 | 33 |
epithelial tube open at both ends | 3.31e-07 | 59 |
blood vessel | 3.31e-07 | 59 |
blood vasculature | 3.31e-07 | 59 |
vascular cord | 3.31e-07 | 59 |