FFCP PHASE1:Hg19::chr14:107083690..107083722,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:107083690..107083722,-
|short_description=p1@IGHV4-59
|description=CAGE_peak_1_at_IGHV4-59_5end
|association_with_transcript=2bp_to_ENST00000455737_5end
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5654 | |HGNC=5654 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000455737_5end | |||
|cluster_id=chr14:107083690..107083722,- | |||
|coexpression_cluster_id=C218 | |||
|description=CAGE_peak_1_at_IGHV4-59_5end | |||
|id=chr14:107083690..107083722,- | |||
|ontology_enrichment_celltype=CL:0000236!2.72e-32!14;CL:0000945!1.20e-17!24;CL:0000826!1.20e-17!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.33e-52;13!CL:0000945;1.90e-27;24!CL:0000542;9.15e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.73e-48,14;CL:0000945,1.88e-27,24;CL:0000826,1.88e-27,24;CL:0000838,1.41e-11,52;CL:0000542,2.54e-11,53;CL:0000051,2.54e-11,53 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.04e-13;2!CL:0000051;9.15e-10;53!UBERON:0004872;2.67e-08;7!UBERON:0006298;1.27e-07;1!UBERON:0008801;1.74e-07;1!UBERON:0001045;2.37e-07;1!UBERON:0006242;2.37e-07;1!UBERON:0009143;3.51e-07;1!UBERON:0006595;3.86e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.12e-38!115;UBERON:0000178!3.92e-12!15;UBERON:0000179!3.92e-12!15;UBERON:0000463!3.92e-12!15;UBERON:0001829!2.99e-08!2;UBERON:0003408!5.42e-08!10;UBERON:0004177!2.07e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.00e-13;2!UBERON:0004921;1.50e-11;33!UBERON:0001044;1.37e-09;6!UBERON:0003293;1.37e-09;6!UBERON:0003294;1.37e-09;6!UBERON:0010047;1.37e-09;6!UBERON:0003408;1.37e-09;6!UBERON:0000167;1.37e-09;6!UBERON:0002372;9.91e-08;1!UBERON:0001961;9.91e-08;1!UBERON:0001744;9.91e-08;1!UBERON:0001042;9.91e-08;1!UBERON:0001735;9.91e-08;1!UBERON:0000029;1.06e-07;1!UBERON:0001736;1.27e-07;1!UBERON:0001831;1.74e-07;1!UBERON:0001567;1.74e-07;1!UBERON:0001154;2.37e-07;1!UBERON:0001153;2.37e-07;1!UBERON:0009854;2.37e-07;1!UBERON:0001041;5.52e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.90e-19,114;UBERON:0001829,2.00e-13,2;UBERON:0001044,1.33e-09,6;UBERON:0003293,1.33e-09,6;UBERON:0003294,1.33e-09,6;UBERON:0010047,1.33e-09,6;UBERON:0000167,1.33e-09,6;UBERON:0002372,9.91e-08,1;UBERON:0001961,9.91e-08,1;UBERON:0001744,9.91e-08,1;UBERON:0001735,9.91e-08,1;UBERON:0000029,1.06e-07,1;UBERON:0001736,1.27e-07,1;UBERON:0006298,1.27e-07,1;UBERON:0001831,1.74e-07,1;UBERON:0001567,1.74e-07,1;UBERON:0008801,1.74e-07,1;UBERON:0001154,2.23e-07,1;UBERON:0001153,2.23e-07,1;UBERON:0001045,2.23e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94336199611388,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,2.18455444504853,2.66852776159066,4.26730222566507,4.00395987036012,2.29900975981793,2.64417949113945,1.90810750907073,1.1384259382189,2.34894875748376,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0.764637207142375,0.569647187174163,1.90585420366231,0.822724546172388,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,3.86797481743607,0,0,0,0,0,0,0,3.64980600856654,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15460723810632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,6.1035719507304,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13375836274523,0,0,0,0,0,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,2.13574825135389,0,0.414239055347196,9.92332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,4.38606213485746,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,1.72090943528111,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25763491755008,0,0,0,0,0,0,0,0,8.55253653616668,0.580120991762195,0,0,0,0,0,7.79839781787719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,4.69114760182158,0,0.129177819672012,0.186224142887574,0,0.190941474834495,0,0.217716747896961,0,10.3048641112319,3.80127688581185,0,0,0,0,0,0,0.122241444182866,0,0,4.6292972525936,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94336199611388,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,2.18455444504853,2.66852776159066,4.26730222566507,4.00395987036012,2.29900975981793,2.64417949113945,1.90810750907073,1.1384259382189,2.34894875748376,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0.764637207142375,0.569647187174163,1.90585420366231,0.822724546172388,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,3.86797481743607,0,0,0,0,0,0,0,3.64980600856654,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15460723810632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,6.1035719507304,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13375836274523,0,0,0,0,0,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,2.13574825135389,0,0.414239055347196,9.92332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,4.38606213485746,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,1.72090943528111,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25763491755008,0,0,0,0,0,0,0,0,8.55253653616668,0.580120991762195,0,0,0,0,0,7.79839781787719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,4.69114760182158,0,0.129177819672012,0.186224142887574,0,0.190941474834495,0,0.217716747896961,0,10.3048641112319,3.80127688581185,0,0,0,0,0,0,0.122241444182866,0,0,4.6292972525936,0 | ||
|short_description=p1@IGHV4-59 | |||
}} | }} |
Latest revision as of 22:52, 18 September 2015
Short description: | p1@IGHV4-59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV4-59_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | 2bp_to_ENST00000455737_5end |
EntrezGene: | NA |
HGNC: | 5654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.73e-48 | 14 |
lymphocyte of B lineage | 1.88e-27 | 24 |
pro-B cell | 1.88e-27 | 24 |
lymphoid lineage restricted progenitor cell | 1.41e-11 | 52 |
lymphocyte | 2.54e-11 | 53 |
common lymphoid progenitor | 2.54e-11 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.90e-19 | 114 |
major salivary gland | 2.00e-13 | 2 |
saliva-secreting gland | 1.33e-09 | 6 |
gland of oral region | 1.33e-09 | 6 |
gland of foregut | 1.33e-09 | 6 |
oral gland | 1.33e-09 | 6 |
oral cavity | 1.33e-09 | 6 |
tonsil | 9.91e-08 | 1 |
mucosa-associated lymphoid tissue | 9.91e-08 | 1 |
lymphoid tissue | 9.91e-08 | 1 |
tonsillar ring | 9.91e-08 | 1 |
lymph node | 1.06e-07 | 1 |
submandibular gland | 1.27e-07 | 1 |
submandibular gland primordium | 1.27e-07 | 1 |
parotid gland | 1.74e-07 | 1 |
cheek | 1.74e-07 | 1 |
parotid gland primordium | 1.74e-07 | 1 |
vermiform appendix | 2.23e-07 | 1 |
caecum | 2.23e-07 | 1 |
midgut | 2.23e-07 | 1 |