FFCP PHASE1:Hg19::chr1:180601215..180601233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9213 | |EntrezGene=9213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12827 | |HGNC=12827 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000367589_5end | |association_with_transcript=47bp_to_ENST00000367589_5end | ||
|cluster_id=chr1:180601215..180601233,+ | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_4_at_XPR1_5end | |description=CAGE_peak_4_at_XPR1_5end | ||
|id=chr1:180601215..180601233,+ | |id=chr1:180601215..180601233,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.60e-09!45;CL:0002057!5.65e-09!42;CL:0000766!1.12e-07!76;CL:0000557!1.42e-07!71;CL:0000839!9.64e-07!70 | |ontology_enrichment_celltype=CL:0000860!2.60e-09!45;CL:0002057!5.65e-09!42;CL:0000766!1.12e-07!76;CL:0000557!1.42e-07!71;CL:0000839!9.64e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.42e-09;33!CL:0002057;9.42e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.12e-09,42;CL:0002057,5.12e-09,42;CL:0000766,9.41e-08,72;CL:0000473,1.44e-07,48;CL:0000234,1.44e-07,48;CL:0000557,2.45e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.01e-08;29!CL:0002057;3.97e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!2.57e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.98e-08;9!UBERON:0001557;5.98e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.97e-08,9;UBERON:0000065,6.11e-07,54;UBERON:0001004,6.82e-07,74 | |||
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| ||
|short_description=p4@XPR1 | |short_description=p4@XPR1 | ||
}} | }} |
Latest revision as of 23:37, 18 September 2015
Short description: | p4@XPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_XPR1_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 47bp_to_ENST00000367589_5end |
EntrezGene: | XPR1 |
HGNC: | 12827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.12e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.12e-09 | 42 |
myeloid leukocyte | 9.41e-08 | 72 |
defensive cell | 1.44e-07 | 48 |
phagocyte | 1.44e-07 | 48 |
granulocyte monocyte progenitor cell | 2.45e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.97e-08 | 9 |
respiratory tract | 6.11e-07 | 54 |
respiratory system | 6.82e-07 | 74 |