FFCP PHASE1:Hg19::chr3:52643526..52643537,-: Difference between revisions
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|id=chr3:52643526..52643537,-
|short_description=p8@PBRM1
|description=CAGE_peak_8_at_PBRM1_5end
|association_with_transcript=-49bp_to_ENST00000462207_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55193 | |EntrezGene=55193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30064 | |HGNC=30064 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000462207_5end | |||
|cluster_id=chr3:52643526..52643537,- | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_8_at_PBRM1_5end | |||
|id=chr3:52643526..52643537,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.42e-195;1!DOID:1357;5.42e-195;1!DOID:0050615;8.02e-14;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.42e-195,1;DOID:1357,5.42e-195,1;DOID:0050615,8.02e-14,16 | |||
|ontology_enrichment_uberon=UBERON:0001893!7.30e-13!34;UBERON:0002780!5.71e-12!41;UBERON:0001890!5.71e-12!41;UBERON:0006240!5.71e-12!41;UBERON:0001869!1.11e-11!32;UBERON:0003080!1.28e-11!42;UBERON:0002791!2.85e-11!33;UBERON:0001950!3.15e-11!20;UBERON:0002020!7.09e-11!34;UBERON:0003528!7.09e-11!34;UBERON:0000956!8.58e-11!25;UBERON:0000203!8.58e-11!25;UBERON:0002619!4.17e-10!22;UBERON:0001017!1.90e-09!82;UBERON:0000955!3.40e-09!69;UBERON:0006238!3.40e-09!69;UBERON:0000200!6.57e-09!6;UBERON:0005743!8.04e-09!86;UBERON:0003056!2.46e-08!61;UBERON:0001049!7.93e-08!57;UBERON:0005068!7.93e-08!57;UBERON:0006241!7.93e-08!57;UBERON:0007135!7.93e-08!57;UBERON:0000073!1.31e-07!94;UBERON:0001016!1.31e-07!94;UBERON:0002616!1.81e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.42e-195;1!UBERON:0001825;5.42e-195;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.42e-195,1;UBERON:0001825,5.42e-195,1 | |||
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| ||
|short_description=p8@PBRM1 | |||
}} | }} |
Latest revision as of 00:29, 19 September 2015
Short description: | p8@PBRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PBRM1_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | -49bp_to_ENST00000462207_5end |
EntrezGene: | PBRM1 |
HGNC: | 30064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.42e-195 | 1 |
paranasal sinus | 5.42e-195 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.42e-195 | 1 |
maxillary sinus cancer | 5.42e-195 | 1 |
respiratory system cancer | 8.02e-14 | 16 |