FFCP PHASE1:Hg19::chr14:21489271..21489284,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14460 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000553593_5end | |||
|cluster_id=chr14:21489271..21489284,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_50_at_NDRG2_5end | |||
|id=chr14:21489271..21489284,- | |||
|ontology_enrichment_celltype=CL:0000575!7.31e-15!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.58e-34;1!UBERON:0008801;3.61e-34;1!UBERON:0006595;3.72e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!1.57e-20!21;UBERON:0001004!2.65e-16!72;UBERON:0001829!1.15e-15!2;UBERON:0006562!1.28e-15!11;UBERON:0003127!2.20e-15!2;UBERON:0000341!2.53e-15!2;UBERON:0000165!4.07e-15!28;UBERON:0000930!4.07e-15!28;UBERON:0000078!6.24e-14!18;UBERON:0001444!5.24e-13!48;UBERON:0000161!7.26e-12!35;UBERON:0003408!1.11e-11!10;UBERON:0001044!1.36e-11!6;UBERON:0003293!1.36e-11!6;UBERON:0003294!1.36e-11!6;UBERON:0010047!1.36e-11!6;UBERON:0000167!1.36e-11!6;UBERON:0001042!2.14e-11!10;UBERON:0009145!2.14e-11!10;UBERON:0000974!2.52e-11!10;UBERON:0000153!1.77e-10!129;UBERON:0007811!1.77e-10!129;UBERON:0001723!2.36e-10!3;UBERON:0001033!2.36e-10!3;UBERON:0010056!2.36e-10!3;UBERON:0004119!1.02e-09!169;UBERON:0000925!1.02e-09!169;UBERON:0006595!1.02e-09!169;UBERON:0003126!1.49e-09!7;UBERON:0001005!1.49e-09!7;UBERON:0007023!3.05e-09!115;UBERON:0000065!3.47e-09!53;UBERON:0001736!1.05e-08!1;UBERON:0006298!1.05e-08!1;UBERON:0001831!1.13e-08!1;UBERON:0001567!1.13e-08!1;UBERON:0008801!1.13e-08!1;UBERON:0002372!1.41e-08!1;UBERON:0001961!1.41e-08!1;UBERON:0001744!1.41e-08!1;UBERON:0001735!1.41e-08!1;UBERON:0001000!1.63e-08!1;UBERON:0005352!1.63e-08!1;UBERON:0002171!2.50e-08!1;UBERON:0006518!2.50e-08!1;UBERON:0008949!2.50e-08!1;UBERON:0000101!2.50e-08!1;UBERON:0002167!2.50e-08!1;UBERON:0001041!3.76e-08!98;UBERON:0002038!4.11e-08!1;UBERON:0009661!4.11e-08!1;UBERON:0000964!7.18e-08!4;UBERON:0004348!7.18e-08!4;UBERON:0005427!7.18e-08!4;UBERON:0001007!3.53e-07!155;UBERON:0001555!3.53e-07!155;UBERON:0007026!3.53e-07!155;UBERON:0000033!5.62e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.45e-66;2!UBERON:0001044;3.84e-50;6!UBERON:0003293;3.84e-50;6!UBERON:0003294;3.84e-50;6!UBERON:0010047;3.84e-50;6!UBERON:0003408;3.84e-50;6!UBERON:0000167;3.84e-50;6!UBERON:0001736;2.58e-34;1!UBERON:0001831;3.61e-34;1!UBERON:0001567;3.61e-34;1!UBERON:0002372;7.06e-34;1!UBERON:0001961;7.06e-34;1!UBERON:0001744;7.06e-34;1!UBERON:0001042;7.06e-34;1!UBERON:0001735;7.06e-34;1!UBERON:0000161;2.49e-28;19!UBERON:0000166;2.49e-28;19!UBERON:0001041;4.67e-22;14!UBERON:0000165;1.84e-19;28!UBERON:0004089;7.67e-18;2!UBERON:0003127;1.07e-17;2!UBERON:0000341;1.07e-17;2!UBERON:0006562;1.07e-17;2!UBERON:0004921;6.34e-14;33!UBERON:0000153;7.17e-12;54!UBERON:0007811;3.02e-11;52!UBERON:0002365;3.39e-10;31!UBERON:0002330;3.39e-10;31!UBERON:0000033;4.12e-09;50!UBERON:0001444;6.78e-09;48!UBERON:0001004;7.13e-09;65!UBERON:0001555;2.69e-07;54!UBERON:0000974;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.45e-66,2;UBERON:0001044,3.84e-50,6;UBERON:0003293,3.84e-50,6;UBERON:0003294,3.84e-50,6;UBERON:0010047,3.84e-50,6;UBERON:0000167,3.84e-50,6;UBERON:0001736,2.58e-34,1;UBERON:0006298,2.58e-34,1;UBERON:0001831,3.61e-34,1;UBERON:0001567,3.61e-34,1;UBERON:0008801,3.61e-34,1;UBERON:0002372,9.85e-34,1;UBERON:0001961,9.85e-34,1;UBERON:0001744,9.85e-34,1;UBERON:0001735,9.85e-34,1;UBERON:0003408,1.68e-30,10;UBERON:0000166,1.51e-24,22;UBERON:0000165,8.53e-19,29;UBERON:0000930,8.53e-19,29;UBERON:0004089,7.67e-18,2;UBERON:0003127,9.07e-18,2;UBERON:0000341,1.07e-17,2;UBERON:0000161,2.86e-15,36;UBERON:0000153,8.92e-14,62;UBERON:0007811,8.92e-14,62;UBERON:0001004,1.25e-11,74;UBERON:0001444,2.22e-11,49;UBERON:0002365,2.08e-10,31;UBERON:0002330,2.08e-10,31;UBERON:0000033,5.00e-10,56;UBERON:0001041,5.89e-10,87;UBERON:0007023,1.11e-07,114;UBERON:0004921,2.22e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.57909320228619,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6277301998894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25712710128173,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0.476128862927481,0,0.124149428591716,0,0,0,0.870866991587845,0.342233301085281,1.01028079521881,0.645499848534087,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p50@NDRG2 | |||
}} |
Latest revision as of 01:10, 19 September 2015
Short description: | p50@NDRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_50_at_NDRG2_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000553593_5end |
EntrezGene: | NDRG2 |
HGNC: | 14460 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.45e-66 | 2 |
saliva-secreting gland | 3.84e-50 | 6 |
gland of oral region | 3.84e-50 | 6 |
gland of foregut | 3.84e-50 | 6 |
oral gland | 3.84e-50 | 6 |
oral cavity | 3.84e-50 | 6 |
submandibular gland | 2.58e-34 | 1 |
submandibular gland primordium | 2.58e-34 | 1 |
parotid gland | 3.61e-34 | 1 |
cheek | 3.61e-34 | 1 |
parotid gland primordium | 3.61e-34 | 1 |
tonsil | 9.85e-34 | 1 |
mucosa-associated lymphoid tissue | 9.85e-34 | 1 |
lymphoid tissue | 9.85e-34 | 1 |
tonsillar ring | 9.85e-34 | 1 |
gland of gut | 1.68e-30 | 10 |
oral opening | 1.51e-24 | 22 |
mouth | 8.53e-19 | 29 |
stomodeum | 8.53e-19 | 29 |
midface | 7.67e-18 | 2 |
open tracheal system trachea | 9.07e-18 | 2 |
throat | 1.07e-17 | 2 |
orifice | 2.86e-15 | 36 |
anterior region of body | 8.92e-14 | 62 |
craniocervical region | 8.92e-14 | 62 |
respiratory system | 1.25e-11 | 74 |
subdivision of head | 2.22e-11 | 49 |
exocrine gland | 2.08e-10 | 31 |
exocrine system | 2.08e-10 | 31 |
head | 5.00e-10 | 56 |
foregut | 5.89e-10 | 87 |
adult organism | 1.11e-07 | 114 |
subdivision of digestive tract | 2.22e-07 | 118 |