FFCP PHASE1:Hg19::chr7:55495851..55495864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55915 | |EntrezGene=55915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6509 | |HGNC=6509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=102bp_to_ENST00000466041_5end | |||
|cluster_id=chr7:55495851..55495864,+ | |||
|description=CAGE_peak_22_at_LANCL2_5end | |||
|id=chr7:55495851..55495864,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.79e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.52e-50;2!CL:0000242;3.52e-50;2!CL:0000312;4.66e-21;5!CL:0000240;8.34e-18;6!CL:0000311;8.34e-18;6!CL:0000079;8.34e-18;6!CL:0000237;8.34e-18;6!CL:0000362;2.31e-12;9!CL:0002159;1.93e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.52e-50,2;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;8.34e-18;6!CL:0000114;8.34e-18;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.23e-15!34;UBERON:0003528!7.23e-15!34;UBERON:0001950!8.27e-14!20;UBERON:0007023!1.28e-12!115;UBERON:0002619!1.67e-12!22;UBERON:0002148!4.08e-11!2;UBERON:0009662!4.08e-11!2;UBERON:0000956!6.36e-11!25;UBERON:0000203!6.36e-11!25;UBERON:0001869!1.66e-10!32;UBERON:0002791!3.73e-10!33;UBERON:0001893!8.02e-10!34;UBERON:0001872!1.92e-09!5;UBERON:0003075!3.37e-08!86;UBERON:0007284!3.37e-08!86;UBERON:0001049!3.72e-08!57;UBERON:0005068!3.72e-08!57;UBERON:0006241!3.72e-08!57;UBERON:0007135!3.72e-08!57;UBERON:0005743!4.90e-08!86;UBERON:0002780!6.10e-08!41;UBERON:0001890!6.10e-08!41;UBERON:0006240!6.10e-08!41;UBERON:0002616!8.11e-08!59;UBERON:0003080!1.01e-07!42;UBERON:0002346!1.02e-07!90;UBERON:0000988!1.09e-07!3;UBERON:0006331!1.09e-07!3;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0001017!2.76e-07!82;UBERON:0000073!4.89e-07!94;UBERON:0001016!4.89e-07!94;UBERON:0002426!8.34e-07!1;UBERON:0003831!8.34e-07!1;UBERON:0003898!8.34e-07!1;UBERON:0004830!8.34e-07!1;UBERON:0001774!8.34e-07!1;UBERON:0003830!8.34e-07!1;UBERON:0005175!8.34e-07!1;UBERON:0003897!8.34e-07!1;UBERON:0001103!8.34e-07!1;UBERON:0010084!8.34e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.74e-08;15!UBERON:0007376;5.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
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|short_description=p22@LANCL2 | |||
}} | }} |
Latest revision as of 01:17, 19 September 2015
Short description: | p22@LANCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_LANCL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000466041_5end |
EntrezGene: | LANCL2 |
HGNC: | 6509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.52e-50 | 2 |
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |