FFCP PHASE1:Hg19::chr8:74207362..74207385,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157506 | |EntrezGene=157506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19975 | |HGNC=19975 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=97bp_to_uc003xzi.2_5end | |association_with_transcript=97bp_to_uc003xzi.2_5end | ||
|cluster_id=chr8:74207362..74207385,+ | |||
|description=CAGE_peak_8_at_RDH10_5end | |description=CAGE_peak_8_at_RDH10_5end | ||
|id=chr8:74207362..74207385,+ | |id=chr8:74207362..74207385,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.54e-19!254;CL:0000223!5.84e-10!59;CL:0002076!3.66e-08!43 | |ontology_enrichment_celltype=CL:0000066!6.54e-19!254;CL:0000223!5.84e-10!59;CL:0002076!3.66e-08!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.19e-11!106;DOID:1749!4.13e-08!14;DOID:0050687!2.29e-07!143 | |ontology_enrichment_disease=DOID:305!1.19e-11!106;DOID:1749!4.13e-08!14;DOID:0050687!2.29e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.08e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.10e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.82e-17!169;UBERON:0000925!1.82e-17!169;UBERON:0006595!1.82e-17!169;UBERON:0001007!8.88e-17!155;UBERON:0001555!8.88e-17!155;UBERON:0007026!8.88e-17!155;UBERON:0004921!2.33e-15!129;UBERON:0004185!2.33e-15!129;UBERON:0000077!1.26e-11!130;UBERON:0005911!5.71e-10!82;UBERON:0000466!1.74e-09!126;UBERON:0001041!1.06e-08!98;UBERON:0009569!1.41e-08!113;UBERON:0003929!1.76e-08!54;UBERON:0002100!2.43e-07!216;UBERON:0003104!3.91e-07!238;UBERON:0009142!3.91e-07!238;UBERON:0005409!8.09e-07!35;UBERON:0000160!8.36e-07!27 | |ontology_enrichment_uberon=UBERON:0004119!1.82e-17!169;UBERON:0000925!1.82e-17!169;UBERON:0006595!1.82e-17!169;UBERON:0001007!8.88e-17!155;UBERON:0001555!8.88e-17!155;UBERON:0007026!8.88e-17!155;UBERON:0004921!2.33e-15!129;UBERON:0004185!2.33e-15!129;UBERON:0000077!1.26e-11!130;UBERON:0005911!5.71e-10!82;UBERON:0000466!1.74e-09!126;UBERON:0001041!1.06e-08!98;UBERON:0009569!1.41e-08!113;UBERON:0003929!1.76e-08!54;UBERON:0002100!2.43e-07!216;UBERON:0003104!3.91e-07!238;UBERON:0009142!3.91e-07!238;UBERON:0005409!8.09e-07!35;UBERON:0000160!8.36e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.62e-08;22!UBERON:0000160;1.11e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.78e-08,17;UBERON:0005409,4.62e-07,25;UBERON:0004921,4.71e-07,118 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,1.34088328328186,0,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0.383829398097213,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.445641827540694,0,0,0,0,0.910415432919148,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0,0,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.523916301990851,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0.71153252537342,0.33472061276467,0.805658634218294,1.52054421143703,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0.515281080091258,0,0,0.0974370051611986,0,0.368199594569197,0.323292113637624,0,0,0.339121184620975,0.773043412653187,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.473227200159376,0.505754070234305,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0,0,0,0.8231480226628,0,2.53510069643662,0.982827216677626,2.36315962672562,0,1.96781501668982,0,0.329250856225877,0,0.703702806881416,0.0925884451585296,0,0,4.3299402607582,0.811512834825538,0.352226082707465,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0.335964256397719,0.567100388969546,0.626909658919938,0,0.383382679165211,0.492663237895943,0.352193736052904,0.414656231081544,0.288239906833923,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,2.61460037580088,0.499864955910285,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0,0.157702415033935,0.35142424497814,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.306923946576125,0.561320188866147,0.640695746278505,1.02341449813341,0.321707842287215,0,0,0.532685175939381,0.164254312027618,0,0.116210378459959,0.241718899183244,1.00253235151642,0.368323955743585,0.459257792658427,0.182091168006717,0.524497659837696,0,0.385076685522074,1.56869953835371,0,0.316654886678627,0,0.340187410553031,0,0,0.812839312631559,0.501689773854853,0.509752546090077,0,0.671624264166535,0,0,0.256450125116389,0.984043937099117,0.650756789328606,0.9273691048295,0.27470839445503,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0.768760269460425,0.255225424989168,1.11273558941105,0,0,0,0.616067160352178,0,0.869932992075073,0,0.572499546967965,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,0.487426979262569,2.11300293513511,0.409499734223957,0.424216295861138,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0.384888450902048,0.670302275535787,0,0.376575203107117,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0.191505370132367,0,0,0.561594356226918,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,2.61996756571508,0.146508179271894,0.242721043499027,0,0,0,0.296964680832639,0.921482106297696,0,0,0.556543525114529,0,0.211125408127993,0,0.276283915531148,0,0.613612095012929,0,0,0.359473404589307,1.9692329214317,0,0.295930216910801,0,1.11136990144637,0.969332746095218,0,0,0,0.61221999997337,0.724999575434793,0.682760689712998,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,1.25481369850743,0,0.113942055847001,0.69169171316418,0.718061155278177,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0.784901281975124,0.332423363800313,0,0.392125068635479,0.167821586975843,0,0.635746315921515,0.421996129056054,1.14262965711403,0.282706142867882,0,1.99052386215701,1.23840590304675,1.22206028986725,0,0,0.104421949505455,0.202203398942031,0,0,0,0.19566461893209,0,0.394584402849391,2.41981432097328,0,0.442306057399416,0.60129367765797,0.311064574191741,0,0.661983911750998,1.2557316736289,0,0.284609546029793,0,0.3471194766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| ||
|short_description=p8@RDH10 | |short_description=p8@RDH10 | ||
}} | }} |
Latest revision as of 01:56, 19 September 2015
Short description: | p8@RDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RDH10_5end |
Coexpression cluster: | NA |
Association with transcript: | 97bp_to_uc003xzi.2_5end |
EntrezGene: | RDH10 |
HGNC: | 19975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.78e-08 | 17 |
gastrointestinal system | 4.62e-07 | 25 |
subdivision of digestive tract | 4.71e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.10e-09 | 14 |