FFCP PHASE1:Hg19::chr15:75639655..75639667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79661 | |EntrezGene=79661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18448 | |HGNC=18448 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-311bp_to_uc002bae.2_5end | |||
|cluster_id=chr15:75639655..75639667,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_7_at_NEIL1_5end | |||
|id=chr15:75639655..75639667,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.62e-19!52;CL:0000542!5.68e-19!53;CL:0000051!5.68e-19!53;CL:0000791!1.18e-12!18;CL:0000789!1.18e-12!18;CL:0002420!1.18e-12!18;CL:0002419!1.18e-12!18;CL:0000790!1.18e-12!18;CL:0000945!2.22e-11!24;CL:0000826!2.22e-11!24;CL:0000236!5.43e-11!14;CL:0000624!3.53e-10!6;CL:0000084!3.87e-08!25;CL:0000827!3.87e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.81e-20;24!CL:0000236;1.03e-16;13!CL:0000542;1.20e-09;53!CL:0000771;6.80e-08;2!CL:0002535;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.00e-20,24;CL:0000826,6.00e-20,24;CL:0000236,1.17e-15,14;CL:0000838,4.07e-12,52;CL:0000542,7.06e-12,53;CL:0000051,7.06e-12,53;CL:0002535,6.15e-08,2;CL:0000771,7.03e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.72e-14;1!CL:0000051;1.20e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.38e-11!34;UBERON:0003528!1.38e-11!34;UBERON:0001869!2.42e-11!32;UBERON:0001893!2.10e-10!34;UBERON:0001049!3.84e-10!57;UBERON:0005068!3.84e-10!57;UBERON:0006241!3.84e-10!57;UBERON:0007135!3.84e-10!57;UBERON:0007023!9.44e-10!115;UBERON:0002791!1.81e-09!33;UBERON:0001950!3.64e-09!20;UBERON:0002780!6.37e-09!41;UBERON:0001890!6.37e-09!41;UBERON:0006240!6.37e-09!41;UBERON:0002616!1.15e-08!59;UBERON:0003080!1.35e-08!42;UBERON:0002619!4.28e-08!22;UBERON:0000956!6.07e-08!25;UBERON:0000203!6.07e-08!25;UBERON:0000955!4.99e-07!69;UBERON:0006238!4.99e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.72e-14;1!UBERON:0001154;1.72e-14;1!UBERON:0001153;1.72e-14;1!UBERON:0009854;1.72e-14;1!UBERON:0001961;1.72e-14;1!UBERON:0001744;1.72e-14;1!UBERON:0001042;1.72e-14;1!UBERON:0001735;1.72e-14;1!UBERON:0002370;4.37e-08;2!UBERON:0005058;4.37e-08;2!UBERON:0009113;4.37e-08;2!UBERON:0006562;6.80e-08;2!UBERON:0006955;6.80e-08;2!UBERON:0004801;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.23e-14,1;UBERON:0001153,1.23e-14,1;UBERON:0001045,1.23e-14,1;UBERON:0002372,2.75e-14,1;UBERON:0001961,2.75e-14,1;UBERON:0001744,2.75e-14,1;UBERON:0001735,2.75e-14,1;UBERON:0006955,6.15e-08,2;UBERON:0004801,6.15e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,4.02829443017569,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0.954053754535364,2.27685187643779,1.76171156811282,3.44045905312706,0,0,0,0.393419540227666,0.393010762749165,1.23360899399706,0.501559486172034,0.32592226663359,0.473447805734733,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0.128091319725675,0.780356085359269,0,0,0,0.14828656316206,0.535081656179426,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,1.23408681925858,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0,1.65770349318689,1.51159648712566,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0.723578631752448,0,0.221158519862449,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0.182248669974074,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.157204305099666,0,0,0,2.80122976276061,0,0,0,0,0,0.314108192500469,0,0,0.751145584238999,0,0,0.18628920882415,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.405225507710368,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.271878931907327,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0.11294608203896,0,0.603851374266694,0,0,0,0,0,0.196308467114945,0,0,0,0,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.735159196278759,0.250707539292375,0,0,0,0,0,0.476128862927481,0.839655827868079,2.66921271472189,0.112131862580613,0.0636471582781649,0,0,0,1.21233695426258,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.402547587182052,0.320568492303233 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| ||
|short_description=p7@NEIL1 | |||
}} | }} |
Latest revision as of 03:35, 19 September 2015
Short description: | p7@NEIL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NEIL1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -311bp_to_uc002bae.2_5end |
EntrezGene: | NEIL1 |
HGNC: | 18448 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.00e-20 | 24 |
pro-B cell | 6.00e-20 | 24 |
B cell | 1.17e-15 | 14 |
lymphoid lineage restricted progenitor cell | 4.07e-12 | 52 |
lymphocyte | 7.06e-12 | 53 |
common lymphoid progenitor | 7.06e-12 | 53 |
epithelial cell of cervix | 6.15e-08 | 2 |
eosinophil | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.23e-14 | 1 |
caecum | 1.23e-14 | 1 |
midgut | 1.23e-14 | 1 |
tonsil | 2.75e-14 | 1 |
mucosa-associated lymphoid tissue | 2.75e-14 | 1 |
lymphoid tissue | 2.75e-14 | 1 |
tonsillar ring | 2.75e-14 | 1 |
uterine epithelium | 6.15e-08 | 2 |
cervix epithelium | 6.15e-08 | 2 |