FFCP PHASE1:Hg19::chr2:191745264..191745275,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2744 | |EntrezGene=2744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4331 | |HGNC=4331 | ||
|TSSclassifier=strong | |||
|UniProt=O94925 | |UniProt=O94925 | ||
|association_with_transcript=-271bp_to_NM_014905,uc002usd.2,uc002use.2,uc002usf.2_5end | |association_with_transcript=-271bp_to_NM_014905,uc002usd.2,uc002use.2,uc002usf.2_5end | ||
|cluster_id=chr2:191745264..191745275,+ | |||
|description=CAGE_peak_21_at_GLS_5end | |description=CAGE_peak_21_at_GLS_5end | ||
|id=chr2:191745264..191745275,+ | |id=chr2:191745264..191745275,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.22e-12!12;CL:0002579!1.22e-08!3;CL:0002580!1.25e-08!3;CL:0000136!2.27e-07!15 | |ontology_enrichment_celltype=CL:0002334!2.22e-12!12;CL:0002579!1.22e-08!3;CL:0002580!1.25e-08!3;CL:0000136!2.27e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.31e-57;12!CL:0002579;3.17e-43;3!CL:0002580;3.41e-43;3!CL:0002615;3.65e-20;3!CL:0000136;6.71e-18;13!CL:0002616;8.02e-16;1!CL:0002581;1.34e-15;1!CL:0002617;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.04e-57,12;CL:0002579,2.95e-43,3;CL:0002580,3.41e-43,3;CL:0002615,4.02e-20,3;CL:0002616,8.63e-16,1;CL:0002581,1.16e-15,1;CL:0000136,1.64e-15,15;CL:0000057,1.05e-08,76;CL:0002617,2.87e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!5.44e-11!6;UBERON:0002358!5.44e-11!6;UBERON:0003684!5.44e-11!6;UBERON:0001178!5.44e-11!6;UBERON:0004457!4.21e-09!12;UBERON:0000042!4.21e-09!12 | |ontology_enrichment_uberon=UBERON:0003688!5.44e-11!6;UBERON:0002358!5.44e-11!6;UBERON:0003684!5.44e-11!6;UBERON:0001178!5.44e-11!6;UBERON:0004457!4.21e-09!12;UBERON:0000042!4.21e-09!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.80e-59;6!UBERON:0002358;2.80e-59;6!UBERON:0003684;2.80e-59;6!UBERON:0001178;2.80e-59;6!UBERON:0004457;1.31e-39;9!UBERON:0000042;1.31e-39;9!UBERON:0005406;1.34e-29;2!UBERON:0000310;5.74e-23;10!UBERON:0001443;6.45e-21;11!UBERON:0004458;3.67e-07;48!UBERON:0002323;9.55e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.98e-59,6;UBERON:0002358,2.98e-59,6;UBERON:0003684,2.98e-59,6;UBERON:0001178,2.98e-59,6;UBERON:0004457,9.60e-30,12;UBERON:0000042,9.60e-30,12;UBERON:0005406,1.24e-29,2;UBERON:0000310,6.26e-23,10;UBERON:0001443,6.98e-21,11;UBERON:0009569,2.05e-09,112;UBERON:0002323,9.02e-08,46;UBERON:0004923,1.64e-07,66;UBERON:0004458,2.73e-07,49 | |||
|phase1_expression=1.09007027562334,0.856402095563933,5.92008497203079,0,2.23480547213644,4.36169262050184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0.511450247374121,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,3.47350930946288,4.910783145218,1.12264037773229,7.04765320906355,1.53512174720011,2.41280881715411,2.96836132889982,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,1.62689197332152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0.150257608997218,1.90402606084398,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.453411851024545,0.463044948647668,0,0,0,0,0,0.38582807654183,0,0.256241518587947,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=1.09007027562334,0.856402095563933,5.92008497203079,0,2.23480547213644,4.36169262050184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0.511450247374121,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,3.47350930946288,4.910783145218,1.12264037773229,7.04765320906355,1.53512174720011,2.41280881715411,2.96836132889982,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,1.62689197332152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0.150257608997218,1.90402606084398,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.453411851024545,0.463044948647668,0,0,0,0,0,0.38582807654183,0,0.256241518587947,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p21@GLS | |short_description=p21@GLS | ||
}} | }} |
Latest revision as of 03:44, 19 September 2015
Short description: | p21@GLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_GLS_5end |
Coexpression cluster: | NA |
Association with transcript: | -271bp_to_NM_014905, uc002usd.2, uc002use.2, uc002usf.2_5end |
EntrezGene: | GLS |
HGNC: | 4331 |
UniProt: | O94925 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.04e-57 | 12 |
omentum preadipocyte | 2.95e-43 | 3 |
preadipocyte of the breast | 3.41e-43 | 3 |
adipocyte of omentum tissue | 4.02e-20 | 3 |
perirenal adipocyte cell | 8.63e-16 | 1 |
perirenal preadipocyte | 1.16e-15 | 1 |
fat cell | 1.64e-15 | 15 |
fibroblast | 1.05e-08 | 76 |
adipocyte of breast | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.98e-59 | 6 |
peritoneum | 2.98e-59 | 6 |
abdominal cavity | 2.98e-59 | 6 |
visceral peritoneum | 2.98e-59 | 6 |
cavity lining | 9.60e-30 | 12 |
serous membrane | 9.60e-30 | 12 |
perirenal fat | 1.24e-29 | 2 |
breast | 6.26e-23 | 10 |
chest | 6.98e-21 | 11 |
subdivision of trunk | 2.05e-09 | 112 |
body cavity | 9.02e-08 | 46 |
organ component layer | 1.64e-07 | 66 |
body cavity or lining | 2.73e-07 | 49 |